Genetic Variability of Brycon hilarii in a Repopulation Program

ABSTRACT Brycon hilarii, popularly called piraputanga in Brazil, is a species distributed throughout the whole basin of the river Paraguay. In recent years, the species has been on a repopulation program due to its remarkable decline as a wild species in the region. Assessment of the genetic diversity of broodstock and fingerling stocks in repopulation programs is basic to avoid genetic impacts on wild populations. The genetic variability of the wild population and of the broodstock and fingerling stocks of B. hilarii in a repopulation program in the river Itiquira MT Brazil will be determined. Seven microsatellite loci produced 52 polymorphic alleles and heterozygosity revealed rates between 0.5794 and 0.7204. FIS did not register any endogamy in the broodstock but it was present in fingerlings and wild populations. Intra- and inter-specific genetic variability rates were higher within each combination but not between groups. Grouping in fingerling groups had a lower density when compared to the others. There is a higher genetic proximity between the natural population and broodstock (0.0237) when the distance between populations was analyzed, even though the two were greatly distant from the fingerling group (0.2622 - 0.2617). Results show that the wild population and the broodstock had high genetic variability and low genetic divergence; contrastingly, fingerlings showed mild genetic variability and great divergence when compared to other groups, indicating that they were not adequately constituted.

Associação genética entre ocorrência de mastite clínica e produção de leite em vacas Holandesas / Genetic association between clinical mastitis occurrence and milk yield in Holstein cows

RESUMO:O objetivo deste trabalho foi estimar os parâmetros genéticos e fenotípicos para ocorrência da mastite clínica (MC) e para a produção de leite acumulada até 305 dias (PR305) e estudar as associações genéticas entre elas, usando informações de 11.738 lactações de 5.084 vacas de um rebanho da raça Holandesa, paridas entre 1995 a 2010. Os componentes de covariância foram obtidos por abordagem Bayesiana, sob modelo animal. As estimativas de herdabilidade para a PR305 e para a MC foram de 0,16 (0,02) e 0,11 (0,02), respectivamente, e as repetibilidades foram 0,34 (0,012) e 0,21 (0,02), para PR305 e MC, respectivamente. A correlação genética entre a PR305 e a MC foi negativa e de baixa magnitude (-0,21±0,13). As estimativas de herdabilidade para PR305 e MC indicam que estas características são influenciadas por fatores ambientais, entretanto há suficiente variabilidade genética para obtenção de ganhos através da seleção.

ABSTRACT:The objective of this study was to estimate genetic and phenotypic parameters for the occurrence of clinical mastitis (MC) and milk production during lactation (PR305) and study the genetic associations between them, using information from 11,738 lactations of 5,084 Holstein herd cows, that calved from 1995 to 2010. The covariance components were estimated by Bayesian inference using the animal model. Heritability estimates for the PR305 and the MC were 0.16 (0.02) and 0.11 (0.02), respectively and repeatability were 0.34 (0.012) for PR305 and 0.21 (0.02) for MC. The genetic correlation between the PR305 and the MC was negative and of low magnitude (-0.21±0.13). Heritability estimates for PR305 and MC indicate that these characteristics are influenced by environmental factors, however there is enough genetic variability to obtain gains through selection.

Aplicação de modelos de regressão aleatória utilizando diferentes estruturas de dados / Application of random regression models using different data structures

Foram utilizadas 3.202 primeiras lactações de vacas da raça Holandesa de quatro fazendas da região Sudeste, para verificar a influência da estrutura de dados de produção de leite sobre os parâmetros genéticos. Foram testados quatro arquivos com diferentes estruturas: controles semanais (CS), arquivo mensal (CM), bimestral (CB) e trimestral (CT), com 122.842, 30.883, 15.837 e 12.702 controles, respectivamente. Um modelo de regressão aleatória foi empregado nas análises, considerando os efeitos genético aditivo e o de ambiente permanente de animal, como aleatórios. Os efeitos fixos, grupos de contemporâneos (GC) foram comuns para todos os arquivos de dados e foram compostos por fazenda, mês e ano do controle, além da co-variável idade da vaca ao parto (regressão linear e quadrática). As estimativas de herdabilidade apresentaram tendências mais semelhantes entre os arquivos de dados CS, CM e CB. O arquivo de dados CB apresentou estimativas de parâmetros genéticos com as mesmas tendências e magnitudes que os arquivos CS e CM, permitindo afirmar que não houve influência da estrutura dos dados sobre as estimativas dos componentes de (co)variância e que o controle leiteiro poderia ser realizado em uma estrutura CB.

A total of 3.035 lactations of Holstein cows from four farms in the Southeast, to check the influence of data structure of milk yield on the genetic parameters. Four dataset with different structures were tested, weekly controls (CW) with 122.842 controls, monthly controls (CM) 30.883, bimonthly controls (CB) with 15,837 and quarterly controls (CQ) with 12,702. The random regression model was used and was considered as random additive genetic and permanent environment effects, fixed effects of the contemporary groups (herd-year-month of test-day) and age of cow (linear and quadratic effects). Heritability estimates showed similar trends among the data files analyzed, with the greatest similarity between dataset CS, CM and CB. The dataset submitted all the CB estimates of genetic parameters analyzed with the same trend and similar magnitude to the CS and CM dataset, allowing the claim that there was no influence of the data structure on estimates of covariance components for the dataset CS, CM and CB. Thus, milk recording could be accomplished in a CB structure.

Effect of lactation length adjustment procedures on genetic parameter estimates for buffalo milk yield

The objectives of this study were to estimate the genetic parameters for milk yield unadjusted and adjusted for days in milk and, subsequently, to assess the influence of adjusting for days in milk on sire rank. Complete lactations from 90 or 150 days of lactation to 270 or 350 days in milk were considered in these analyses. Milk yield was adjusted for days in milk by multiplicative correction factors, or by including lactation length as a covariable in the model. Milk yields adjusted by different procedures were considered as different traits. Heritability estimates varied from 0.17 to 0.28. Genetic correlation estimates between milk yields unadjusted and adjusted for days in milk were greater than 0.82. Adjusting for days in milk affected the parameter estimates. Multiplicative correction factors produced the highest heritability estimates. More reliable breeding value estimates can be expected by including short length lactation records in the analyses and adjusting the milk yields for days in milk, regardless of the method used for the adjustment. High selection intensity coupled to the inclusion of short length lactations and adjustment with multiplicative factors can change the sire rank..

Genetic parameters for milk, fat and protein yields in Murrah buffaloes (Bubalus bubalis Artiodactyla, Bovidae)

The objective of the present study was to estimate genetic parameters for test-day milk, fat and protein yields and 305-day-yields in Murrah buffaloes. 4,757 complete lactations of Murrah buffaloes were analyzed. Co-variance components were estimated by the restricted maximum likelihood method. The models included additive direct genetic and permanent environmental effects as random effects, and the fixed effects of contemporary group, milking number and age of the cow at calving as linear and quadratic covariables. Contemporary groups were defined by herd-year-month of test for test-day yields and by herd-year-season of calving for 305-day yields. The heritability estimates obtained by two-trait analysis ranged from 0.15 to 0.24 for milk, 0.16 to 0.23 for protein and 0.13 to 0.22 for fat, yields. Genetic and phenotypic correlations were all positive. The observed population additive genetic variation indicated that selection might be an effective tool in changing population means in milk, fat and protein yields.

Modelos de dimensão finita para a estimação de parâmetros genéticos para a produção de leite de primeiras lactações de vacas da raça Holandesa / Finite dimension models to estimate genetic parameters for first lactation milk yields of Holstein cows

Foram estimados parâmetros genéticos para produção de leite acumulada até 305 dias (P305) e produção de leite no dia do controle (PLDC) de 50.171 controles mensais de 9.281 primeiras lactações de vacas da raça Holandesa. A P305 e as PLDC foram analisadas por meio de modelo animal uni e bicaracterísticas. Para a P305 o modelo incluiu como aleatório, o efeito genético e como efeitos fixos o grupo de contemporâneos e a covariável idade da vaca ao parto. Para as PLDC foi usado o mesmo modelo descrito para a P305, incluindo como covariável o número de dias em lactação. Os componentes de variância foram estimados pelo Método da Máxima Verossimilhança Restrita. As estimativas de herdabilidade (h²) para as PLDC oscilaram entre 0,07 e 0,19 em análises unicaracterísticas e, de 0,12 a 0,22 nas bicaracterísticas. Para a P305, as h² resultantes das análises uni-característica e bicaracterística foram 0,26 e 0,27, respectivamente. As correlações genéticas das PLDC com a P305 foram todas positivas e elevadas, variando de 0,63 a 1,00. As correlações genéticas entre as PLDC variaram de 0,30 a 1,00. A seleção para a P305 parece ser o melhor critério de seleção a ser adotado, uma vez que proporciona maiores ganhos genéticos para as produções de leite em, praticamente, todos os controles da lactação.

Genetic parameters for 50,171 first lactation test-day milk yields and 305 day milk yield (Y305) of 9,281 Holstein cows were estimated, applying uni and bi-trait animal models. The model for Y305 included the additive genetic effect as random and the fixed effects of contemporary group and age of cow at calving as covariable. For TDMY the same animal model described for Y305 was used, including days in milk as covariable. Variance components were estimated by Restricted Maximum Likelihood. Heritability estimates obtained for TDMY ranged from 0.07 to 0.19 and from 0.12 to 0.22 by uni-trait and bi-trait analysis, respectively. Heritability for Y305 was 0.26 by uni-trait and 0.27 by bi-trait analysis. The genetic correlations between TDMY and Y305 were all positive and high, ranging from 0.63 to 1.00. The genetic correlations between TDMY ranged from 0.30 to 1.00. Selection for Y305 seems to be the best selection criterion to be adopted, since it provides larger genetic gain for milk productions in, practically, all test days.