Molecular variability in the maize grey leaf spot pathogens in Brazil

Isolates of Cercospora species from leaves displaying symptoms of grey leaf spot were collected in maize-producing areas of south-central Brazil in 2001 and 2002. Restriction digests of the internal transcribed spacer region of rDNA detected the presence of the same two Cercospora species described on maize in the United States, namely C. zeae-maydis and the recently described species, C. zeina. Genetic variability among isolates was assessed by analysing 104 amplified fragment length polymorphism loci. Cluster analysis confirmed the genetic separation of isolates into two species with a mean similarity of 35%. Similarity levels within species were high, averaging 93% and 92% among isolates of C. zeae-maydis and C. zeina, respectively. The mean genetic similarity between C. zeae-maydis and C. zeina and two isolates of C. sorghi f. sp. maydis was 45% and 35%, respectively. Results of this study showed that populations of the grey leaf spot pathogens in Brazil are similar to those in the United States regarding species composition and that C. zeina is also present in Brazil.

A homolog of the RPS2 disease resistance gene is constitutively expressed in Brassica oleracea

In this study, we identified disease resistance gene homologs in Brassica oleracea and assessed their expression in lines resistant and susceptible to Xanthomonas campestris pv. campestris (Xcc). Two DNA fragments of approximately 2.5 kb (BI-16/RPS2 and Lc201/RPS2) were amplified by PCR from two Brassica lines using primers based on an RPS2 homologous sequence previously described in the Brassica oleracea ecotype B117. The sequences of these fragments shared high similarity (95-98 percent) with RPS2 homologs from various Brassica species. The digestion of these fragments with restriction enzymes revealed polymorphisms at the Xba I restriction sites. The length polymorphisms were used as a co-dominant marker in an F2 population developed to segregate for resistance to Xcc, the causal agent of black rot. Linkage analysis showed no significant association between the marker and quantitative trait loci for black rot. RT-PCR with specific primers yielded an expected 453 bp fragment that corresponded to the RPS2 homologs in both resistant and susceptible lines inoculated with the pathogen, as well as in non-inoculated control plants. These results suggest that these homologs are constitutively expressed in B. oleracea.

Análise comparativa da estabilidade do DNA de Dalbulus maidis (DeLong & Wolcott) (Hemiptera: Cicadellidae) sob diferentes métodos de preservação para uso em RAPD-PCR / Comparative analysis of the stability of DNA of Dalbulus maidis (DeLong & Wolcott) (Hemiptera: Cicadellidae) under different methods of preservation for use in RAPD-PCR

The appropriate preservation of the DNA of a certain organism is important for successful application of molecular techniques like RAPD-PCR. This study was designed to compare simple methods of preservation of specimens of Dalbulus maidis (DeLong & Wolcott) (Hemiptera: Cicadellidae) with respect to quantity and quality of DNA for use in RAPD-PCR, after different storage periods. Eight methods were tested: freezing (-20°C); ethyl alcohol 70 percent (-20°C and room temperature); absolute ethyl alcohol (-20°C and room temperature); air-dry; and preservation in extraction buffer (whole and homogenized insect). At intervals of 10 to 30 days, insect DNA was extracted, quantified and amplified through RAPD-PCR using primer OPA-04. The quality of extracted DNA was observed on 0.8 percent agarose gel. After 210 days of preservation, freezing (-20°C) showed to be the best method. Satisfactory quantities of DNA were also obtained from insects conserved in absolute ethyl alcohol (-20°C), ethyl alcohol 70 percent (-20°C) and extraction buffer (whole and homogenized insect). Insects conserved in absolute ethyl alcohol (room temperature), ethyl alcohol 70 percent (room temperature) and air-dry conditions were inappropriate for RAPD-PCR studies after 120, 60 and 10 days of storage, respectively.

A preservação adequada do DNA de um determinado organismo é fundamental para o sucesso no uso de técnicas moleculares como RAPD-PCR. O objetivo deste trabalho foi comparar métodos simples de preservação de espécimes de Dalbulus maidis (DeLong & Wolcott) (Hemiptera: Cicadellidae) quanto à quantidade e qualidade do DNA para uso em RAPD-PCR, após períodos sucessivos de armazenamento. Avaliaram-se oito métodos: congelamento (-20°C); álcool etílico 70 por cento (-20°C e temperatura ambiente); álcool etílico absoluto (-20°C e temperatura ambiente); secagem ao ar; e preservação em tampão de extração (inseto inteiro e macerado). A intervalos de 10-30 dias, o DNA foi extraído, quantificado e amplificado via RAPD-PCR pelo oligonucleotídeo OPA-04. A qualidade do DNA extraído foi observada em gel de agarose 0,8 por cento. Após 210 dias de armazenamento, o congelamento (-20°C) mostrou ser a melhor técnica. Quantidades satisfatórias de DNA também foram obtidas dos insetos conservados em álcool etílico absoluto (-20°C), álcool etílico 70 por cento (-20°C) e tampão de extração (inseto inteiro e macerado). Insetos conservados em álcool etílico absoluto (temperatura ambiente), em álcool etílico 70 por cento (temperatura ambiente) e secos ao ar mostraram-se impróprios para estudos com RAPD-PCR após 120, 60 e 10 dias de armazenamento, respectivamente.