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Journal of Sun Yat-sen University(Medical Sciences) ; (6): 01-13, 2019.
Article in Chinese | WPRIM | ID: wpr-817648

ABSTRACT

@#【Objective】To investigate the lncRNA expression profile and potential roles in mouse intestinal mucosa after I/R treatment and explore the co-expression relationship between dysregulated lncRNA and apoptotic mRNA at the early stage of reperfusion. 【Methods】 The expression profiles of lncRNA were obtained using microarray and some lncRNA were further validated by quantitative real- time polymerase chain reaction (qRT- PCR). Gene ontology(GO)analyses were performed to determine closely related biological functions,especially apoptosis-related functions. Finally, the known apoptosis- related mRNA with obviously changes were selected to construct the co-expression network of the dysregulated lncRNA and their correlated apoptotic mRNA, and were analyzed by CNC analysis to calculate the significant correlation of IncRNA-mRNA pairs.【Results】Compared with sham operation group,the expression profile of lncRNA in intestinal epithelium of mice after intestinal I/R was significantly changed ,including 1 503 up- regulated lncRNAs and 2 099 down- regulated lncRNA (Fold change≥2,P<0.05). At the same time,1 528 mRNA were up- regulated in I/R group,while 1 630 mRNA were down- regulated(fold change≥2.0,P<0.05). GO enrichment analysis showed that the main functions involved in regulation were lipid metabolism,redox reaction,stress reaction,apoptosis process,programmed cell death,cell cycle,inflammatory response,endothelial cell differentiation and proliferation, tissue remodeling,MAPK,Wnt,vascular endothelial growth factor signaling pathway and so on. Apoptosis-related subitems were enriched in the up- and down-regulated annotations of GO molecular function in different forms ,which were in the forefront. There was a significant co-expression relationship between apoptosis- related mRNA and dysregulated lncRNA. 【Conclusion】 In this study,we established and preliminarily validated the expression profiles of the differentially expressed lncRNA at the early stage of reperfusion in mouse intestinal ischemia injury. Bioinformatics analysis showed that the important biological function of dysregulated lncRNA was the regulation of apoptosis-related processes,and a large number of those lncRNA were indeed highly coexpressed with apoptotic genes ,which would provide a basis and direction for future research.

2.
Chinese Journal of Infection Control ; (4): 999-1003, 2017.
Article in Chinese | WPRIM | ID: wpr-701506

ABSTRACT

Objective To study virulence factors and drug resistance mechanism of linezolid-intermediate Enterococcus faecalis(E.faecalis) isolated from patients with bloodstream infection.Methods Two linezolid-intermediate E.faecalis strains,namely A and B,were isolated from two patients with bloodstream infection,the treatment of two patients was analyzed.The minimum inhibitory concentration (MIC) of linezolid and vancomycin were determined.The virulence genes (esp,asa1,gelE,ace,agg,efaA,cylA,and hyl) and linezolid resistance genes (domain V region of the 23SrRNA,cfr,cfr[B],optrA) were amplified by polymerase chain reaction (PCR).PCR products of domain V region of 23SrRNA gene were sequenced and analyzed.Results Symptoms of two patients who isolated two linezolid-intermediate E.faecalis strains were controlled after accepted linezolid therapy.Strains A and B were both susceptible to vancomycin(MICs were 1μg/mL and 4μg/mL respectively),teicoplain,ampicillin,and nitrofurantoin,while intermediate to linezolid(MIC were both 4μg/mL).Two strains both contained multiple virulence factors,strain A were negative for cylA and hyl,strain B were negative for hyl and esp,but positive for other virulence genes.There was G2621T mutation in domain V region of 23SrRNA in strain A,and no variation was found in strain B.Drug resistance genes of cfr,cfr(B),and optrA were all negative in both strain A and B.Conclusion In the present study,two linezolid-intermediate E.faecalis strains isolated from patients with bloodstream infection were susceptible to vancomycin and ampicillin,although the treatment of linezolid in two patients is effective,the utilization of linezolid therapy in clinical practice still needs to be cautious.The mutation of target site is a significant resistance mechanism,it is necessary for us to pay more attention to these clinical strains which are non-susceptible to such antimicrobial agents,and the treatment strategy needs further study.

3.
Chinese Journal of Experimental and Clinical Virology ; (6): 211-213, 2008.
Article in Chinese | WPRIM | ID: wpr-254101

ABSTRACT

<p><b>OBJECTIVE</b>To investigate of the relationship of the immunosuppression induced by Measles virus in adult patients and CD4+ CD25+ regulatory T cell.</p><p><b>METHODS</b>Thirty-four patients with measles and 27 healthy control subjects were included in this study. The whole blood was collected and CD4+ CD25+ cell and FoxP3+ cell were analyzed by flow cytometry, and CD4+ CD25- and CD4+ CD25+ T lymphocytes were isolated from PBMCs of patients with measles or healthy donors, CD4+ CD25- T cells were cultured in absence or presence of anti-CD3, or BCG, or live attenuated MV. The cell culture supernatant was collected after 72 hours and the concentration of IFN-gamma and IL-10 was determined.</p><p><b>RESULTS</b>Compared to healthy donors, we observed a reduction of the number of white blood cells and lymphocytes in patients with measles, but there was not significantly different in the frequency of CD4+ CD25+ T cells and CD4+ CD25high T cells within the total CD4+ population in the blood. Treg from both measles patients and healthy controls significantly inhibited IFN-gamma production by CD4+ CD25- T cells in response to anti-CD3 stimulation.</p><p><b>CONCLUSION</b>Induction and expansion of Treg may not represent a mechanism involved in the establishment of immune suppression by MV.</p>


Subject(s)
Adolescent , Adult , Female , Humans , Male , Young Adult , CD4 Antigens , Allergy and Immunology , Cells, Cultured , Immunosuppression Therapy , Interleukin-2 Receptor alpha Subunit , Allergy and Immunology , Lymphocyte Activation , Measles , Allergy and Immunology , Virology , Measles virus , Allergy and Immunology , T-Lymphocytes, Regulatory , Allergy and Immunology
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