Microbial mat ecosystems: structure types, functional diversity, and biotechnological application

Microbial mats are horizontally stratified microbial communities, exhibiting a structure defined by physiochemical gradients, which models microbial diversity, physiological activities, and their dynamics as a whole system. These ecosystems are commonly associated with aquatic habitats, including hot springs, hypersaline ponds, and intertidal coastal zones and oligotrophic environments, all of them harbour phototrophic mats and other environments such as acidic hot springs or acid mine drainage harbour non-photosynthetic mats. This review analyses the complex structure, diversity, and interactions between the microorganisms that form the framework of different types of microbial mats located around the globe. Furthermore, the many tools that allow studying microbial mats in depth and their potential biotechnological applications are discussed.

La rizobacteria promotora del crecimiento vegetal Arthrobacter agilis UMCV2 coloniza endofíticamente a Medicago truncatula / The plant growth-promoting rhizobacterium Arthrobacter agilis UMCV2 endophytically colonizes Medicago truncatula

Arthrobacter agilis UMCV2 es una bacteria rizosférica que promueve el crecimiento vegetal de plantas leguminosas proveyéndoles hierro soluble. Un segundo mecanismo de promoción se da a través de la producción de compuestos volátiles que estimulan los mecanismos de absorción de hierro. Adicionalmente, A. agilis UMCV2 tiene la capacidad de inhibir el crecimiento de organismos fitopatógenos. En el presente trabajo se emplea una combinación de las técnicas de reacción en cadena de la polimerasa cuantitativa e hibridación in situ con fluorescencia para detectar y cuantificar la presencia de la bacteria en los tejidos internos de la planta leguminosa Medicago truncatula. Nuestros resultados demuestran que A. agilis UMCV2 se comporta como una bacteria endófita de M. truncatula especialmente en medios donde el hierro está disponible.

Arthrobacter agilis UMCV2 is a rhizosphere bacterium that promotes legume growth by solubilization of iron, which is supplied to the plant. A second growth promotion mechanism produces volatile compounds that stimulate iron uptake activities. Additionally, A. agilis UMCV2 is capable of inhibiting the growth of phytopathogens. A combination of quantitative polymerase chain reaction and fluorescence in situ hybridization techniques were used here to detect and quantify the presence of the bacterium in the internal tissues of the legume Medicago truncatula. Our results demonstrate that A. agilis UMCV2 behaves as an endophytic bacterium of M. truncatula, particularly in environments where iron is available.