Planning of ecologically suitable areas for Ligusticum chuanxiong under background of soil cadmium pollution / 中国中药杂志

Chuanxiong Rhizoma is a traditional Chinese medicinal material mainly produced in Sichuan and Chongqing of China. In recent years, the cadmium content in Chuanxiong Rhizoma produced in most of the genuine producing areas has exceeded the standard, which makes Chuanxiong Rhizoma difficult to be exported. To solve the problem of excessive cadmium content in soil, this study employed the MaxEnt model to simulate the potential geographic distribution of Ligusticum chuanxiong and evaluate important environmental factors, and re-plan its ecologically suitable areas based on the mineral distribution characteristics and soil cadmium pollution status. The results showed that the places suitable for L. chuanxiong growing covered an area of 335 523.69 km~2, mainly in central and eastern Sichuan, southern Shaanxi and most parts of Chongqing. Among them, the highly suitable areas of L. chuanxiong were mainly concentrated in Chengdu, Ya'an, Deyang, and Mianyang. Solar radiation, annual precipitation, and annual range of temperature were evaluated as important variables affecting the distribution of L. chuanxiong, with the contribution rates of 62.3%, 13.3%, and 6.8%, respectively. In addition, Qionglai county, Chongqing county, Mianyang city(Youxian district and Fucheng district), Qingchuan county, and Xinjin county were classified into the first-class ecologically suitable zone, covering a total area of 2 768.87 km~2. The se-cond-class ecologically suitable zone was even wider, involving such counties as Tongjiang county, Renshou county, Jianyang county, and Nanjiang county, and the total area reached 43 616.92 km~2. The re-planning of the ecologically suitable areas for L. chuanxiong has provided strong data support for the cultivation and resource development of L. chuanxiong and also new ideas for solving the problem of excessive cadmium content in L. chuanxiong.

Eco-hidrologia integrada ao manejo dos recursos hídricos em áreas úmidas: caso do Banhado do Taim, RS / Ecohydrology integrated to the water resources management in wetlands: the Taim Wetland case, RS, Brazil

RESUMO A eco-hidrologia busca integrar os conhecimentos da hidrologia aos da ecologia, criando uma abordagem mais ampla para a compreensão da dinâmica dos recursos hídricos, facilitando o planejamento e as ações de programas de gestão. Uma das formas de integrar hidrologia à ecologia é por meio da elaboração de índices de adequabilidade de hábitat (IAHs), processo que tem se destacado por fornecer informações relevantes sobre áreas úmidas. O IAH é obtido pela relação entre as informações sobre espécies bioindicadoras e as condições eco-hidrológicas necessárias à sua sobrevivência, permitindo a avaliação de impactos sobre as espécies. O desenvolvimento de IAHs, integrados a processos de modelagem hidrodinâmica e sistemas de informação geográfica (SIGs), proporciona a obtenção de imagens de adequabilidade de hábitat, que permitem obter informações espacializadas sobre a qualidade do hábitat de determinada espécie, ou grupo de espécies, colaborando para o aperfeiçoamento das estratégias de gerenciamento dos recursos hídricos e a conservação da biodiversidade de áreas úmidas. A fim de melhor elucidar o processo de desenvolvimento de IAHs e sua aplicação, é apresentada a metodologia utilizada para avaliar a adequabilidade do Banhado do Taim, inserido na Estação Ecológica do Taim, importante área úmida localizada no sul da planície costeira do Rio Grande do Sul.

ABSTRACT The ecohydrology aims at integrating the concepts of hydrology and ecology, creating a broader approach to understand the water resources' dynamics, facilitating the plan and management of resources. One way to integrate hydrology with ecology is by developing Habitat Suitability Index (HSI), a process that stands out by providing relevant information on wetlands. HSI is obtained by relating the information about the bioindicators and ecohydrological conditions necessary to ensure these species' survival, enabling to evaluate the impacts on them. The development of HSIs integrated with hydrodynamic modeling and Geographic Information Systems (GIS) allows us to obtain spatialized habitat suitability information, that provide information about the quality of a species' (or group of species') habitat, contributing to the improvement of water resources management strategies combined with the biodiversity conservation in wetlands. Regarding this, the present article presents the HSI's development process and its application to evaluate the suitability of the Taim Basin, inserted in Taim Ecological Station, an important Southern Coastal wetland located in the State of Rio Grande do Sul.

Habitat suitability evaluation for Angelica dahurica planting in Yanting county,Sichuan province based on GIS / 中国中药杂志

It is of great significance to analyze habitable suitability of genuine medicinal materials for Chinese herbal medicine planting according to local environment,for medicinal resources protecting and for reasonable planning introduction. Based on GIS technology,the analytic hierarchy process was applied to analyze the spatial differentiation of habitat suitability of Angelica dahurica in Yanting county of Sichuan province. The evaluation combined local geographical environment characteristics and habitat requirements for A. dahurica planting and adopted the expert experience method to screen out the evaluation index for establishing evaluation system.With the established evaluation system,the index weight of evaluating index was determined by analytic hierarchy process and their grouping values were assigned by Delphi method. The all evaluating index were translated into index distribution maps using Arc GIS software. Using the comprehensive factor weighted evaluating model and spatial index distribution map,the evaluation was obtained by means of the overlay analysis function of Arc GIS 10. 3 software. RESULTS:: showed that A. dahurica had a wide range of suitable planting areas in Yanting county. Highly suitable areas amounted to 165. 01 km2,and mainly distributed in the low hilly area with moderate elevation and fertile soil. Moderately suitable areas amounted to 798. 92 km2 which had extensive distribution in middle and west part of the county. Marginally suitable areas amounted to 0. 33 km2,where the soil was highly viscous with high altitude and low temperature that was not conducive to the growth and development of A. dahurica. Adapting to local conditions and scientific planning plays an important role in the development of local characteristic planting industry of genuine medicinal materials.

Physical habitat simulation for small-sized characid fish species from tropical rivers in Brazil

Physical habitat simulation (PHABSIM) is an important step of the instream flow incremental methodology (IFIM), which is applied to establish environmental flow regimes. This study applied the PHABSIM in two reaches of the Velhas river basin, whose long-term discharges are similar but are under different degrees of impact. Suitability curves were obtained for fish species using traditional methods (Astyanax sp., Piabarchus stramineus, Piabina argentea and Serrapinnus heterodon) and generalized additive models for fish density (Astyanax sp., P. argentea and S. heterodon). The results of habitat use depended on the method for curves generation. Applying the suitability curves by traditional methods, different discharge scenarios were simulated. The flow increasing from a dry scenario to a discharge of 1 year of return promotes a possible habitat increase for all species. However, the same hydrological flow percentiles produce different habitat proportions in different rivers. This work demonstrates that regardless of how suitability curves for the Neotropical species are generated, caution should be taken when applying them. However, the PHABSIM method allows more complex analyses than the traditional approaches based on minimal flow estimations, which is usually applied in South America.(AU)

A simulação de habitat para espécies de peixes (PHABSIM) é uma etapa importante do método Instream Flow Incremental Methodology (IFIM), cuja aplicação está relacionada a determinação da vazão ecológica. O presente estudo aplicou PHABSIM em dois trechos da bacia do rio das Velhas, cujas vazões de médio prazo são semelhantes, mas sob condições de conservação ambiental diferente. Curvas de aptidão foram obtidas para Astyanax sp., Piabarchus stramineus, Piabina argentea e Serrapinnus heterodon através do método tradicional e ajustando modelo aditivos generalizados (Astyanax sp., P. argentea e S. heterodon). Os resultados sugerem uso de habitats diferentes dependendo do modelo utilizado para gerar as curvas. Aplicando as curvas obtidas pelo método tradicional no PHABSIM, diferentes cenários de vazão foram simulados. O aumento da vazão para cheia de um ano de retorno aumenta o habitat provável para todas as espécies. Entretanto, mesmo cenário de vazão, fornecido por análise de hidrológica de percentis de ocorrência, fornece diferente proporção de habitat em diferentes rios. O trabalho demonstra que curvas de aptidão para espécies neotropicais, independentemente da forma de geração, devem ser usadas com cautela. Entretanto, o método PHABSIM permite análises mais elaboradas do que as tradicionais estimativas de vazão mínima empregadas na América do Sul.(AU)

Zika: probabilidad de establecimiento de su vector, Aedes aegypti, en Chile / Zika: probability of establishment of its vector, Aedes aegypti, in Chile

Resumen El virus Zika ha despertado una alarma mundial en los últimos años, representando un problema importante para la salud pública. En este estudio evaluamos el riesgo potencial de exposición a virus Zika en Chile, asociado a la probabilidad de establecimiento del vector Aedes aegypti en el país. Se utilizaron técnicas de modelación de nicho para proyectar los requerimientos bioclimáticos del vector (nicho global), identificando las zonas de alta idoneidad para la especie en el país. Luego, se superpuso la distribución potencial del vector en Chile con la densidad de población humana, estimando en forma espacialmente explícita el riesgo asociado a la co-ocurrencia potencial de ambos. Identificamos que existe idoneidad bioclimática para A. aegypti en Chile continental, desde el área tropical del norte hasta regiones templadas, principalmente en zonas costeras. La población potencialmente expuesta podría alcanzar 1,8 millones de personas, con 1,3 millones en nivel medio y 21.000 en niveles altos de riesgo potencial de exposición. Los resultados expuestos aquí muestran que existe una significativa probabilidad de éxito de colonización del vector principal de virus Zika en Chile continental en caso de una introducción. Por lo tanto, la prevención, monitoreo y control se vuelven un tema importante para evitar la llegada de este vector a Chile continental.

The Zika virus has raised world alarm in recent years, representing a major public health problem. In this study we evaluated the potential risk of exposure to Zika virus in Chile, associated with the probability of establishment of the vector Aedes aegypti in the country. Niche modelling techniques were used to project the bioclimatic requirements of the vector (global niches), identifying zones of high suitability for the species within the country. Then, the potential distribution of the vector in Chile was overlapped with the human population density, estimating the risk associated to the potential co-occurrence of both in a spatially explicit manner. We identified bioclimatic suitability for A. aegypti in continental Chile, from the northern tropical area to temperate regions, mainly in coastal zones. The exposed population could reach 1.8 million people, with 1.3 million in a medium level of potential risk and 21,000 in a high level. These results support that there is a significant probability of success for the Zika virus main vector to colonize continental Chile in case of an introduction. Therefore, prevention, monitoring, and control play an important role in avoiding the arrival of this vector to our country.

Production regionalization study of Isatidis Radix / 中国中药杂志

In this research, we collected information of eighty nine sampling points of Isatidis Radix nationwide through data query and field survey, and the medicinal component contents of samples were determined by HPLC. By using Maxent Model and ArcGIS, along with ecological factor data, the national habitat suitability distribution of Isatidis Radix was predicted. R-language was adopted to establish a model of the relationship between the medicinal component contents and ecological factors. The medicinal quality was divided by ArcGIS grid computing. The results indicated that the three main ecological factors affecting the distribution of Isatidis Radix were precipitation in the driest season, mean annual temperature and mean temperature in the wet season. The suitable cultivation region of Isatidis Radix is mainly distributed in the north of China, but the medicinal quality is quite different, Isatidis Radix in Xinjiang province has higher medicinal quality. This study provides a reference for rational selection of planting areas of Isatidis Radix.

Modeling habitat suitability of the invasive clam Corbicula fluminea in a Neotropical shallow lagoon, southern Brazil / Modelagem da adequabilidade de habitat do bivalve invasor Corbicula fluminea em uma lagoa rasa Neotropical

Abstract This study aimed to model the habitat suitability for an invasive clam Corbicula fluminea in a coastal shallow lagoon in the southern Neotropical region (–30.22, –50.55). The lagoon (19km2, maximum deep 2.5m) was sampled with an Ekman dredge in an orthogonal matrix comprising 84 points. At each sampling point, were obtained environmental descriptors as depth, organic matter content (OMC), average granulometry (Avgran), and the percentage of sand (Pcsand). Prediction performance of Generalized Linear Models (GLM), Generalized Additive Models (GAM) and Boosted Regression Tree (BRT) were compared. Also, niche overlapping with other native clam species (Castalia martensi, Neocorbicula limosa and Anodontites trapesialis) was examined. A BRT model with 1400 trees was selected as the best model, with cross-validated correlation of 0.82. The relative contributions of predictors were Pcsand-42.6%, OMC-35.8%, Avgran-10.9% and Depth-10.8%. Were identified that C. fluminea occur mainly in sandy sediments with few organic matter, in shallow areas nor by the shore. The PCA showed a wide niche overlap with the native clam species C. martensi, N. limosa and A. trapesialis.

Resumo O objetivo de deste estudo foi modelar a adequabilidade de habitat do bivalve invasor Corbicula fluminea em uma lagoa costeira na região Neotropical (–30.22, –50.55). A lagoa (19km2, 2,5 m de profundidade máxima) foi amostrada com uma draga Ekman em uma matriz ortogonal compreendendo 84 pontos. Em cada ponto de amostragem foram obtidos descritores ambientais como a profundidade, teor de matéria orgânica (OMC), granulometria média (Avgran), e a percentagem de areia (Pcsand). O poder preditivo dos métodos Modelos Lineares Generalizados (GLM), Modelos Aditivos Generalizados (GAM) e Boosted Regression Trees (BRT) foram comparados. Além disso, a sobreposição de nicho com espécies de moluscos nativos (Castalia martensi, Neocorbicula limosa e Anodontites trapesialis) foi examinada. Um modelo BRT com 1.400 árvores foi selecionado como o melhor modelo, com correlação da validação cruzada de 0,82. As contribuições relativas dos preditores foram Pcsand-42,6%, OMC-35,8%, Avgran-10,9% e profundidade-10,8%. Foi demonstrado que C. fluminea está associada a sedimentos arenosos com pouca matéria orgânica, em áreas rasas próximo às margens. A PCA mostrou uma ampla sobreposição de nicho com as espécies de moluscos nativos C. martensi, N. limosa e A. trapesialis.

Habitat suitability and quality division of Mentha haplocalyx / 中国中药杂志

In this study, ecological factors, occurrence records, the essential oil components content were used to predict the potential geographical distribution and quality division of Mentha haplocalyx in China based on the MaxEnt modeling and geographic information system(GIS). The AUC of ROC curve was above 0.950,indicating that the predictive results with the maximum model were highly precise. The results showed that the main environmental factors determining the potential distribution were annual average precipitation (the contribution rate, 45.87%), mean temperature of wettest quarter (11.92%), mean temperature of warmest quarter (7.84%), average monthly precipitation of May (6.80%), standard deviation of seasonal temperature variation (4.42%), mean temperature of the coldest quarter (3.47%) and altitude (2.92%). The environmental variables in the highly potential areas were determined as annual average precipitation around [530,1 465] mm, mean temperature of wettest quarter around [24.5,29] ℃, mean temperature of the warmest quarter around [25.5,29] ℃, average monthly precipitation of May around [67,133] mm, standard deviation of temperature seasonal change around [8 333,9 643], mean temperature of the coldest quarter around [1.7,8.3] ℃ and the altitude around [0,165] mm. The best quality distribution of M. haplocalyx was mainly located in Jiangsu, Anhui, Shandong, Zhejiang and Heilongjiang. The zoning results basically coincide with the actual situation. The quality division of M. haplocalyx can be used for providing a scientific basis for selection of artificial planting base and guidance of its production.

Application of the physical habitat simulation for fish species to assess environmental flows in an Atlantic Forest Stream in South-eastern Brazil

The physical habitat simulation sub-routine of the Instream Flow Incremental Methodology (IFIM) uses hydraulic modeling and suitability indices of target fish species to predict how differences in-stream flows affect the microhabitat occupation by fish species. This habitat modelling approach was adopted to assess the ecological effects of running flows on three neotropical fish species of different orders (Bryconamericus ornaticeps , Ancistrus multispinis and Geophagus brasiliensis ).The study encompassed two reaches of an Atlantic Forest stream in Southeastern Brazil where topographic and hydraulic (depth, velocity and type of substrate) characteristics were measured to implement one-dimensional hydraulic simulation. Sub aquatic observation of fish was performed to collect data on microhabitat use and these data were used to develop habitat suitability curves that were used in the habitat simulation to obtain the habitat suitability index (HSI) and weighted usable area (WUA) versus flow curves. Upon these curves minimum and optimum environmental flows for the target fish species were proposed. Bryconamericus ornaticeps and A. multispinis selected microhabitats around 0.6 m depth, whereas G. brasiliensis showed a wider suitable range (0.35-0.9 m). All the three species were mainly observed in microhabitat with low flow velocity (0.1 m/s). Bryconamericus ornaticeps selected more frequently coarse substrate (e.g. boulders) but it appeared also over sandy substrate, whereas A. multispinis and G. brasiliensis selected preferably boulders. The range of 0.65-0.85 m3/s was found as the optimum to meet the needs of the three fish species. Our results agree with the necessary objective information to perform grounded management actions in the frame of a management program aiming at ecosystem conservation. Thereby it can be considered a successful pilot study in environmental flow assessment in an Atlantic Forest stream of Brazil.

A sub-rotina simulação de habitat físico da metodologia incremental - IFIM usa variáveis hidráulicas e os índices de aptidão das espécies alvo para predizer como diferentes vazões afetam a ocupação de microhabitat por espécies de peixes. Esta abordagem de simulação de hábitat foi adotada para avaliar os efeitos ecológicos sobre três espécies de peixes tropicais de diferentes ordens (Bryconamericus ornaticeps , Ancistrus multispinis e Geophagus brasiliensis ) em dois trechos de um riacho de Mata Atlântica do sudeste do Brasil, durante a estação chuvosa de 2013 e a estação seca de 2014. Características topográficas e hidráulicas (profundidade, velocidade e tipo de substrato) foram mensuradas para implementação da simulação de habitat em uma dimensão; observações subaquáticas dos peixes foram realizadas para avaliação do uso do microhabitat. As curvas de aptidão de habitat de cada variável hidráulica foram utilizadas na simulação de habitat para obtenção das curvas de aptidão composta (HSI) e a área útil ponderada (WUA) versus fluxo, e propor vazões ambientais mínimas e ideais para as espécies de peixes-alvo. A amplitude de vazão de 0,65-0,85 m3/s foi registrada como o ótimo para satisfazer as necessidades das três espécies de peixes. Esta é uma informação objetiva para os gestores de recursos hídricos e que pode ser aplicada no planejamento de programas de gestão visando a conservação dos ecossistemas. Desse modo, pode ser considerado um estudo piloto bem sucedido na avaliação do fluxo ambiental em um riacho da Mata Atlântica do Brasil.

Distribution and habitat suitability index model for the Andean catfish Astroblepus ubidiai (Pisces: Siluriformes) in Ecuador

In conservation biology there is a basic need to determine habitat suitability and availability. Astroblepus ubidiai (Siluriforms), the only native fish in the highlands of Imbabura province in the Ecuadorian Andes, was abundant in the past in the Imbakucha watershed and adjacent drainages, but currently it is restricted to a few isolated refuges. Conservation actions are needed if this unique fish is to persist. A Habitat Suitability Index (HSI) for the species has been developed in order to aid management decisions. In this HSI model biomass density (B) was selected as a better indicator of habitat quality than either abundance or density. A population well-being index (PI) was constructed with the combination of B and an indicator of fish health (proportion of fish in the population with parasites and deformities). Based in other models of benthic fish the habitat variables current velocity, flow, depth, width, cover, invertebrate composition, vegetation type, terrestrial vegetation, land use, substrate, temperature, pH, TDS, oxygen, altitude, and slope were included in the analysis. An anthropogenic perturbation index (H) and a fragment isolation index (FII) were developed and included as habitat variables as well. The HSI model was applied to refuges and a sample of 15 aquatic bodies without fish populations within the study region. From the sampled sites without A. ubidiai 26.6% presented low quality, and the remaining 73.3% had medium quality according to the HSI estimated. Good quality habitat for dispersal, escape or translocations is rare in the region. The low HSIs estimated in some of the refuges suggests that current populations are not settled in the most favorable habitat but in the habitat least favorable to the agents of decline.

Astroblepus ubidiai (Siluriformes), el único pez nativo de las alturas de Imbabura, en los Andes Ecuatorianos, era un recurso abundante en el pasado. Actualmente su distribución está limitada a unos cuantos refugios aislados. Se necesitan acciones de conservación para que esta especie perdure. Se desarrolló un modelo para estimar el índice de calidad de hábitat (ICH) que ayude en futuras decisiones de manejo. En este ICH la densidad de biomasa (B) fue seleccionada como un mejor indicador de calidad de hábitat, comparada con el uso común de abundancia o densidad incorporado en otros modelos. Se generó un índice de bienestar poblacional (IP) basado en B y en un indicador de salud poblacional (SP) derivado de la proporción de peces en la población con parásitos y malformaciones. Diecinueve variables físicas, biológicas y geográficas fueron evaluadas dentro del modelo, el cual fue aplicado a una muestra de 15 sitios sin poblaciones de A. ubidiai entro del área de estudio. De esta muestra, 26.6% de los sitios presentó baja calidad de hábitat, y el restante 73.3% presentó calidad media de acuerdo a la evaluación con el modelo. En la región hay escasos hábitats de buena calidad para dispersión, escape y reubicación de este pez.