Diagnosis, treatment, control and prevention of SARS-CoV-2 and coronavirus disease 2019: back to the future / 生物工程学报

The ongoing outbreak of the coronavirus disease 2019 (COVID-19) as named by the World Health Organization has millions of confirmed cases around the world and has claimed hundreds of thousands of lives. The virus was named SARS-CoV-2 in February by International Committee on Taxonomy of Viruses. COVID-19 presents as fever, dry cough, dyspnea, headache and pneumonia. In a small subset of severe cases, the disease quickly progresses to respiratory failure and even death. Since the 21st century, there have been three major outbreaks caused by human coronaviruses, including the severe acute respiratory syndrome (SARS) that broke out in 2003, the Middle East respiratory syndrome (MERS) in 2012, and the recent pandemic of COVID-19. Since 2003, significant progress has been made in the study of SARS-CoV and MERS-CoV concerning their natural origins, pathogenesis, antiviral development and vaccine design. Since SARS-CoV-2 and SARS-CoV are closely related, previous findings on SARS-CoV are highly relevant to a better understanding as well as diagnosis, treatment, prevention and control of SARS-CoV-2. In this review, we highlight recent progresses in the field; compare the biological characteristics of SARS-CoV and SARS-CoV-2; summarize the urgently-needed diagnostic, treatment, prevention and control options; and provide future perspectives for the outcome of the outbreak and research questions to be answered, including some of the difficulties in vaccine development. Hopefully, our comments and suggestions would prove useful for the control of the SARS-CoV-2 epidemic in China and the world.

Aislamientos virales en niños y adultos con infecciones respiratorias agudas / Viral isolations in children and adults with acute respiratory infections

Introducción: las infecciones respiratorias agudas constituyen un grupo de enfermedades que varían desde un catarro común hasta procesos broncopulmonares graves. Entre los agentes causales figuran los virus, los cuales se diseminan por las secreciones respiratorias. Objetivos: mostrar la positividad de aislamientos virales en niños y adultos, vivos o fallecidos, con infecciones respiratorias agudas. Métodos: se efectuó un estudio descriptivo y observacional de 364 pacientes de la provincia de Camagüey, ingresados con el diagnóstico de infecciones respiratorias agudas, desde enero de 2011 hasta diciembre de 2012. A cada enfermo se le llenó una encuesta epidemiológica y se le tomó muestra de exudado nasofaríngeo o biopsia del tejido pulmonar en el caso de los fallecidos. Estas se inocularon en medio de transporte y fueron remitidas a centros especializados para realizar el diagnóstico virológico. Resultados: del total de pacientes con positividad viral, 221 eran niños (30,3 %) y 143 adultos (36,3 %). Entre los virus predominantes figuraron: rinovirus, sincitial respiratorio de tipo A e influenza A (H1N1) pdm09. Conclusiones: más de la cuarta parte de los pacientes tuvieron virus respiratorios. La población infantil fue la más dañada, la de mayor letalidad y coinfecciones de rinovirus con otros virus respiratorios.

Introduction: the acute respiratory infections constitute a group of diseases which vary from a common cold to serious bronchopulmonary processes. Among the causal agents there are the viruses, which are disseminated by the respiratory secretions. Objectives: to show the positivity of viral isolations in children and adults, alive or dead, with acute respiratory infections. Methods: a descriptive and observational study of 364 patients in Camagüey province admitted with the diagnosis of acute respiratory infections was carried out from January, 2011 to December, 2012. An epidemiological survey was filled and samples of nasopharyngeal exudates were taken from each sick person, or lung tissue biopsy were obtained in cases of deads. These were inoculated in transport media and they were referred to specialized centers to carry out the virological diagnosis. Results: of the total of patients with viral positivity, 221 were children (30.3%) and 143 adults (36.3%). Among the predominant viruses there were: rhinovirus, respiratory syncytial type A and influenza A (H1N1) pdm09. Conclusions: more than the fourth part of patients had respiratory virus and the child population was the most affected, with higher lethality and rhinovirus coinfections with other respiratory viruses.

Diagnóstico virológico de la infección por virus sincitial respiratorio / Virological diagnosis of respiratory syncytial virus

La enfermedad respiratoria aguda se define como un conjunto de infecciones del tracto respiratorio que pueden ser causadas por una gran variedad de microorganismos tanto virales como bacterianos, y que constituyen un importante problema de salud pública en el mundo. La infección por Virus Sincitial Respiratorio (VSR) está catalogada como una de las principales causas de enfermedad respiratoria aguda, presentándo se especialmente en niños menores de dos años. La falta de diagnóstico confiable de la etiología en las infecciones respiratorias, da como resultado un manejo inadecuado de los pacientes, lo cual puede originar varios tipos de complicaciones. Por tal razón, en esta revisión de la literatura nos enfocamos en presentar un panorama general de la situación de las infecciones respiratorias debidas a VSR en Latinoamérica y las principales dificultades que se presentan al realizar el diagnostico virológico. Para el caso puntual del VSR debido a que todos los agentes etiológicos producen signos y síntomas similares, estos no pueden ser tomados como referencia para distinguir el agente etiológico asociado, así que, en este trabajo se describen las estrategias para realizar el diagnostico de VSR como por ejemplo los que se encargan de detectar anticuerpos específicos en el suero y también los métodos de detección del virus directamente en la muestra de secreción respiratoria, es decir el aislamiento viral en cultivo celular, la detección de antígenos por fluorescencia y la detección de ácidos nucleicos.

Acute respiratory disease is defined as a set of respiratory tract infections that can be caused by a variety of both viral and bacterial microorganisms, which constitute a major public health problem in the world. Respiratory Syncytial Virus (RSV) infection is listed as a major cause of acute respiratory disease, occurring especially in children less than two years old. The lack of accurate diagnosis of respiratory infections etiology, results in an inadequate management of patients, which can cause lots of complications. Thus, this review is focused on presenting an overview of the status of respiratory infections due to RSV in Latin America and the main difficulties related with performing the virological diagnosis. For the specific case of RSV, since all etiologic agents produce similar symptoms, clinical signs cannot be taken as a reference to distinguish the etiological agent of the disease, so, in this paper we describe strategies for diagnosis of RSV such as those that detects specific antibodies in serum and also methods that directly detects the virus in the respiratory secretion sample, in other words, the viral isolation in cell culture, antigens and nucleic acid detection.