ABSTRACT
The harm of plant virus disease is serious, which significantly restricts the sustainable development of agriculture and can cause huge economic losses. Monitoring plant health and early detection of viral pathogens are essential to reduce the spread of disease. Therefore, in order to realize the early detection of plant viral diseases in the field, a sensitive, specific and efficient colorimetric visual technique for plant viral RNA was designed by combining the colorimetric method based on gold nanoparticles (AuNPs) and hybrid chain reaction (HCR). In this study, tobacco mosaic virus (TMV) was used as a model to design two hairpin structures H1/ H2 with single-stranded tails based on TMV-specific conserved fragments. TMV could open the hairpin structure to alternately form long double-straight DNA. The binding difference between AuNPs and two nucleic acid states before and after HCR reaction resulted in colorimetric signal generation, thus realizing visual detection of TMV. After optimizing the concentration of Tris-HAc, the concentration of hairpin structure and the reaction time of HCR, the best detection conditions were obtained. The sensitivity and specificity of the technique were analyzed and real samples were tested under optimal conditions. The results showed that the absorbance ratio of AuNPs (A
ABSTRACT
The accuracy of two different methods in measuring the ammonia nitrogen (N-NH3) concentration in rumen fluid were evaluated: a catalyzed indophenol colorimetric reaction (CICR) and the Kjeldahl distillation (KD). Five buffered standard solutions containing volatile fatty acids, true protein, and known ammonia concentrations (0, 3, 6, 12, and 24 N-NH3 mg/dL) were used to simulate rumen fluid. Different ratios (10:1, 7.5:1, 5:1, 2.5:1, 1:1, 1:2.5, 1:5, 1:7.5, and 1:10) of a potassium hydroxide solution (KOH, 2 mol/L) to standard solutions were evaluated by the KD method. The accuracy of each method was evaluated by adjusting a simple linear regression model of the estimated N-NH3 concentrations on the N-NH3 concentrations in the standard solutions. When the KD method was used, N-NH3 was observed to be released from the deamination of true protein (P<0.05), and an incomplete recovery of N-NH3 was observed (P<0.05), except for 7.5:1 and 5:1 ratios of KOH solution to standard solutions (P>0.05). The estimates of the N-NH3 concentration obtained by the CICR method were found to be accurate (P>0.05). After the accuracy evaluation, ninety-three samples of rumen fluid were evaluated by the CICR and KD methods (using the 5:1 ratio of KOH solution to rumen fluid sample), assuming that the CICR estimates would be accurate. The N-NH3 concentrations obtained by the two methods were observed to be different (P<0.05) but strongly correlated (r = 0.9701). Thus, it was concluded that the estimates obtained by the Kjeldahl distillation using a 5:1 ratio of KOH solution to rumen fluid sample can be adjusted to avoid biases. Furthermore, a model to adjust the N-NH3 concentration is suggested.
Avaliou-se a exatidão de dois métodos para mensuração da concentração de nitrogênio amoniacal (N-NH3) em fluido ruminal: reação colorimétrica catalisada por indofenol (RCCI) e destilação de Kjeldahl (DK). Cinco soluções-tampão contendo ácidos graxos voláteis, proteína verdadeira e concentrações conhecidas de amônia (0, 3, 6, 12 e 24 N-NH3mg/dL) foram utilizadas para simular o fluido ruminal. Diferentes relações (10:1; 7,5:1; 5:1; 2,5:1; 1:1; 1:2,5; 1:5; 1:7,5 e 1:10) entre a solução de hidróxido de potássio (KOH, 2 mol/L) e as soluções-padrão foram avaliadas no método DK. A exatidão de cada método foi avaliada por intermédio do ajustamento de um modelo de regressão linear simples das concentrações estimadas de N-NH3sobre as concentrações reais de N-NH3nas soluções-padrão. Com a utilização da DK observou-se que N-NH3foi liberada a partir da deaminação de proteína verdadeira (P<0,05). Adicionalmente, a utilização da DK promoveu recuperação incompleta da N-NH3(P<0,05), com exceção das razões entre a solução de KOH e as soluções-padrão de de 7,5:1 e de 5:1 (P>0,05). As estimativas de concentração de amônia obtidas por intermédio do método de RCCI foram exatas (P>0,05). Após a avaliação da exatidão, noventa e três amostras de fluido ruminal foram avaliadas por intermédio dos métodos de RCCI e de DK (neste caso usando a razão entre solução de KOH e fluido ruminal de 5:1). Nesta avaliação assumiu-se que as estimativas obtidas com a RCCI seriam exatas. Observou-se que as concentrações de N-NH3obtidas pelos dois métodos foram diferentes (P<0,05), mas fortemente correlacionadas (r = 0,9701). Concluiu-se que as estimativas obtidas com a DK utilizando-se razão entre a solução de KOH e a amostra de fluido ruminal de 5:1 poderiam ser ajustadas para correções de vieses Um modelo para realização desse ajustamento foi sugerido.