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1.
Braz. arch. biol. technol ; 64: e21200319, 2021. tab, graf
Article in English | LILACS | ID: biblio-1345491

ABSTRACT

Abstract Alkaline pectinase is the utmost significant industrial enzyme of the bioscouring process. By considering bio scouring of cotton, 30 microbial isolates from fruit and vegetable waste rich dump soil of Solang Valley and Vasishta (Manali, Himachal Pradesh, India) were isolated and screened for the alkaline pectinase production in the current research work. Only four isolates P3, P16, P21, and P27 were capable to produce extracellular alkaline pectinase at pH 9. Further by applying submerged fermentation, the alkaline pectinase production was quantitatively screened. The most efficient isolate was P3 identified as Bacillus tropicus, based on morphological, biochemical, and molecular characterization. Molecular characteristics confirmed by 16S rDNA sequence analysis. The nucleotide sequence of the isolate was novel with a 97% similarity index and submitted to the GenBank with accession number MK332379. The Bacillus strain selected was active at broad pH range from 8-10.5 and a temperature range from 25-50 oC. Optimum pH and temperature observed were 9 and 37 oC respectively and can be suitably used for the bio scouring process for the pretreatment of the fabrics.


Subject(s)
Polygalacturonase , Bacillus/isolation & purification , Fermentation , Garbage
2.
Braz. arch. biol. technol ; 64: e21190020, 2021. tab, graf
Article in English | LILACS | ID: biblio-1153295

ABSTRACT

HIGHLIGHTS Screening extremophile Bacillus strains from various Hot Springs Characterization Of Bacillus Strains Producing Highly Thermostable Amylase Genetic identification of the best strains


Abstract Currently thermostable Amylase represents a broad biotechnological interest and desired by a various industries. In this study, forty-six bacterial strains belonging to the genus Bacillus were isolated from various hot springs in the North West of Algeria based on their ability to degrade starch and produce amylase in Starch Agar medium. The majority of isolates showed a positive amylolytic activity. In order to select the most thermostables amylase the effect of temperature on enzymes was estimated, therefore the study of amylase thermostability was culminated by the selection of Four Strains having an interesting optimum of activity and range of stability, reaching 75 °C for the strains HBH1-2, HBH1-3, HBH3-1and 85 °C for the strain HC-2, This indicates that the Enzyme produced by retained strains have optimum activity at high temperature. The identity of the selected strains was established on the basis of the morphological, biochemical characteristics and phylogenetic position as determined by 16S Ribosomal DNA gene sequencing. The whole strains belonged to the genus Bacillus and their phylogeny were also reported in this study.


Subject(s)
Bacillus/isolation & purification , Bacillus/classification , Hot Springs/microbiology , Amylases , Phylogeny , Bacillus/genetics , RNA, Ribosomal, 16S , Algeria , Hot Temperature
3.
Pesqui. vet. bras ; 39(10): 796-801, Oct. 2019. tab
Article in English | LILACS, VETINDEX | ID: biblio-1056903

ABSTRACT

Respiratory diseases are among the most important diseases in sheep flocks. Herein was studied the bacterial etiology of respiratory disease and the clinical signs of 99 female and male sheep breed in the states of São Paulo (SP) and Rio de Janeiro (RJ), Brazil. After physical examination of animals, tracheobronchial flushing samples were obtained. The usual bacteria and Mycoplasma spp. were searched, as well as their association with the clinical status and clinical signs of sheep with respiratory disease. The main observed signs were: tachypnea (75%), increase of rectal temperature (09.4%), mucopurulent/purulent nasal discharge (21.9%), cough (25%), dyspnea (31.2%), changes of lung sounds at auscultation (87.5%) and chest percussion (28.1%) in pneumonic sheep. Non-fermenting gram-negative bacteria and Bacillus sp. were the most isolated bacteria. Microorganisms of the Mollicutes class were molecularly (PCR) detected in 33.3% of the animals. In addition, the specific detection of M. mycoides subsp. capri was described for the first time in sheep from the state of São Paulo, Brazil.(AU)


A doença respiratória é uma das doenças mais importantes em rebanhos ovinos. Esta pesquisa teve como objetivo determinar a etiologia bacteriana da doença respiratória e sua relação com sinais clínicos em ovinos criados nos estados de São Paulo e Rio de Janeiro, Brasil. Noventa e nove ovelhas machos e fêmeas dos Estados de São Paulo (SP) e Rio de Janeiro (RJ) foram estudadas. Após o exame físico, amostras de lavagem traqueobrônquica foram obtidas. A presença de bactérias aeróbias e Mycoplasmaspp. foram estudados, assim como a associação entre os microrganismos e estado clínico e sinais clínicos de doença respiratória em ovinos. As principais manifestações clínicas observadas foram: taquipneia (75%), alta temperatura retal (09,4%), secreção nasal mucopurulenta/purulenta (21,9%), tosse (25%), dispneia (31,2%), sons pulmonares alterados na ausculta (87,5%) e na percussão torácica (28,1%) em ovelhas pneumônicas. Bactérias gram-negativas não fermentadoras e Bacillus sp. foram as bactérias mais isoladas. Microrganismos da classe Mollicutes foram detectados molecularmente (PCR) em 33,3% dos ovinos. Além disso, descreve-se pela primeira vez no estado de São Paulo, Brasil, a detecção do M. mycoides subsp. capri na espécie ovina utilizando a reação de polimerase em cadeia.(AU)


Subject(s)
Animals , Pasteurella Infections/veterinary , Pneumonia/etiology , Pneumonia/veterinary , Sheep , Mycoplasma Infections/veterinary , Sheep Diseases/microbiology , Bacillus/isolation & purification , Pasteurella/isolation & purification , Klebsiella/isolation & purification , Mycoplasma/isolation & purification
4.
Braz. j. microbiol ; 49(2): 429-442, Apr.-June 2018. tab, graf
Article in English | LILACS | ID: biblio-889226

ABSTRACT

Abstract Bacteria are important sources of cellulases with various industrial and biotechnological applications. In view of this, a non-hemolytic bacterial strain, tolerant to various environmental pollutants (heavy metals and organic solvents), showing high cellulolytic index (7.89) was isolated from cattle shed soil and identified as Bacillus sp. SV1 (99.27% pairwise similarity with Bacillus korlensis). Extracellular cellulases showed the presence of endoglucanase, total cellulase and β-glucosidase activities. Cellulase production was induced in presence of cellulose (3.3 times CMCase, 2.9 times FPase and 2.1 times β-glucosidase), and enhanced (115.1% CMCase) by low-cost corn steep solids. An in silico investigation of endoglucanase (EC 3.2.1.4) protein sequences of three Bacillus spp. as query, revealed their similarities with members of nine bacterial phyla and to Eukaryota (represented by Arthropoda and Nematoda), and also highlighted of a convergent and divergent evolution from other enzymes of different substrate [(1,3)-linked beta-d-glucans, xylan and chitosan] specificities. Characteristic conserved signature indels were observed among members of Actinobacteria (7 aa insert) and Firmicutes (9 aa insert) that served as a potential tool in support of their relatedness in phylogenetic trees.


Subject(s)
Animals , Cattle , Bacillus/enzymology , Cellulase/genetics , Cellulase/metabolism , Evolution, Molecular , Bacillus/growth & development , Bacillus/isolation & purification , Cellulose/metabolism , Computational Biology , Feces/microbiology , Gene Expression Regulation, Bacterial , Gene Expression Regulation, Enzymologic , INDEL Mutation , Sequence Analysis, DNA , Sequence Homology , Substrate Specificity , Zea mays/metabolism
5.
Braz. j. microbiol ; 49(1): 54-59, Jan.-Mar. 2018. tab
Article in English | LILACS | ID: biblio-889195

ABSTRACT

ABSTRACT Plant Growth Promoting Rhizobacteria (PGPR) have different mechanisms of action in the development of plants, such as growth promotion, production of phytohormones and antibiotic substances and changes in root exudates. These help to control plant diseases. In order to evaluate the potential of microorganisms in the control of Meloidogyne javanica and Ditylenchus spp., five rhizobacteria isolated from rhizosphere of garlic cultivated in the Curitibanos (SC) region were tested. Hatching chambers were set on Petri dishes, in which were added 10 mL of bacterial suspension and 1 mL of M. javanica eggs suspension, at the rate of 4500, on the filter paper of each chamber. The same procedure was performed with 300 juvenile Ditylenchus spp. The experimental design was completely randomized, with four replications. The evaluations were performed every 72 h for nine days. The antagonized population of nematodes was determined in Peters counting chamber, determining the percentage hatching (for M. javanica) and motility (for Ditylenchus spp). Isolates CBSAL02 and CBSAL05 significantly reduced the hatching of M. javanica eggs (74% and 54.77%, respectively) and the motility of Ditylenchus spp. (55.19% and 53.53%, respectively) in vitro. Isolates were identified as belonging to the genera Pseudomonas (CBSAL05) and Bacillus (CBSAL02).


Subject(s)
Animals , Bacillus/physiology , Plant Diseases/prevention & control , Pseudomonas/physiology , Tylenchoidea/microbiology , Bacillus/genetics , Bacillus/isolation & purification , Pest Control, Biological , Plant Diseases/parasitology , Pseudomonas/genetics , Pseudomonas/isolation & purification , Tylenchoidea/physiology
6.
An. acad. bras. ciênc ; 90(1): 73-84, Mar. 2018. tab
Article in English | LILACS | ID: biblio-886885

ABSTRACT

ABSTRACT The adhesion ability of bacteria to abiotic surfaces has important implications in food industries, because these organisms can survive for long periods through the biofilm formation. They can be transferred from one place to another in the industry causing contamination of the food processing environment. In this study, the antibacterial and antibiofilm activities of the antimicrobial peptide P34, characterized as a bacteriocin-like substance (BLS P34) were tested against planktonic and sessile cells of Staphylococcus aureus and Enterococcus faecalis isolated from foods. The BLS P34 showed inhibitory effect against all planktonic cells of E. faecalis. The inhibition of biofilm formation and the eradication of pre-formed biofilm were evaluated with the crystal violet assay and with the reduction of 3-bromide [4,5-dimethylthiazol-2-yl]-2,5-diphenyltetrazolium. The BLS P34 promoted a reduction of percentage of adhered microbial cells on the surface, not being able to perform the complete elimination of biofilm formation. The metabolic activity of S. aureus biofilms decreased considerably between 41-95%. However, E. faecalis cells showed up metabolically stimulated. The BLS P34 has the potential antibiofilm for the species S. aureus. Studies suggest more detailed approaches to a better understanding of the interactions between the antimicrobial and bacterial cells within the biofilm structure.


Subject(s)
Animals , Oligopeptides/pharmacology , Staphylococcus aureus/drug effects , Bacteriocins/pharmacology , Enterococcus faecalis/drug effects , Biofilms/drug effects , Anti-Bacterial Agents/pharmacology , Bacillus/isolation & purification , Bacillus/metabolism , Bacteriocins/isolation & purification , Bacterial Adhesion/drug effects , Microbial Sensitivity Tests , Analysis of Variance
7.
Braz. j. microbiol ; 48(4): 656-670, Oct.-Dec. 2017. tab, graf
Article in English | LILACS | ID: biblio-889178

ABSTRACT

ABSTRACT This study aimed to explore the effects of two siderophore-producing bacterial strains on iron absorption and plant growth of peanut in calcareous soil. Two siderophore-producing bacterial strains, namely, YZ29 and DZ13, isolated from the rhizosphere soil of peanut, were identified as Paenibacillus illinoisensis and Bacillus sp., respectively. In potted experiments, YZ29 and DZ13 enhanced root activity, chlorophyll and active iron content in leaves, total nitrogen, phosphorus and potassium accumulation of plants and increased the quality of peanut kernels and plant biomass over control. In the field trial, the inoculated treatments performed better than the controls, and the pod yields of the three treatments inoculated with YZ29, DZ13, and YZ29 + DZ13 (1:1) increased by 37.05%, 13.80% and 13.57%, respectively, compared with the control. Based on terminal restriction fragment length polymorphism analysis, YZ29 and DZ13 improved the bacterial community richness and species diversity of soil surrounding the peanut roots. Therefore, YZ29 and DZ13 can be used as candidate bacterial strains to relieve chlorosis of peanut and promote peanut growth. The present study is the first to explore the effect of siderophores produced by P. illinoisensis on iron absorption.


Subject(s)
Arachis/growth & development , Arachis/microbiology , Bacillus/metabolism , Paenibacillus/metabolism , Iron/metabolism , Arachis/metabolism , Arachis/chemistry , Seeds/growth & development , Seeds/metabolism , Seeds/microbiology , Seeds/chemistry , Soil/chemistry , Soil Microbiology , Bacillus/isolation & purification , Bacillus/classification , Bacillus/genetics , Biological Transport , Siderophores/metabolism , Plant Roots/microbiology , Paenibacillus/isolation & purification , Paenibacillus/classification , Paenibacillus/genetics , Rhizosphere , Agricultural Inoculants/metabolism
8.
Braz. j. microbiol ; 48(3): 451-460, July-Sept. 2017. tab, graf
Article in English | LILACS | ID: biblio-889134

ABSTRACT

Abstract This study was focused on the polyhydroxybutyrate (PHB) accumulation property of Bacillus aryabhattai isolated from environment. Twenty-four polyhydroxyalkanoate (PHA) producers were screened out from sixty-two environmental bacterial isolates based on Sudan Black B colony staining. Based on their PHA accumulation property, six promising isolates were further screened out. The most productive isolate PHB10 was identified as B. aryabhattai PHB10. The polymer production maxima were 3.264 g/L, 2.181 g/L, 1.47 g/L, 1.742 g/L and 1.786 g/L in glucose, fructose, maltose, starch and glycerol respectively. The bacterial culture reached its stationary and declining phases at 18 h and 21 h respectively and indicated growth-associated PHB production. Nuclear Magnetic Resonance (NMR) spectra confirmed the material as PHB. The material has thermal stability between 30 and 140 °C, melting point at 170 °C and maximum thermal degradation at 287 °C. The molecular weight and poly dispersion index of the polymer were found as 199.7 kDa and 2.67 respectively. The bacterium B. aryabhattai accumulating PHB up to 75% of cell dry mass utilizing various carbon sources is a potential candidate for large scale production of bacterial polyhydroxybutyrate.


Subject(s)
Bacillus/metabolism , Polyhydroxyalkanoates/biosynthesis , Starch/metabolism , Bacillus/isolation & purification , Bacillus/growth & development , Bacillus/genetics , Culture Media/metabolism , Culture Media/chemistry , Environmental Microbiology , Polyhydroxyalkanoates/chemistry , Glycerol/metabolism
9.
Rev. argent. microbiol ; 48(4): 333-341, dic. 2016. ilus, tab
Article in Spanish | LILACS | ID: biblio-843176

ABSTRACT

Las cactáceas son la vegetación característica de las zonas áridas en México, donde las lluvias son escasas, la evapotranspiración es elevada y la fertilidad de los suelos es baja. Las plantas han desarrollado estrategias fisiológicas como la asociación con microorganismos en la zona de la rizósfera para incrementar la captación de nutrientes. En el presente trabajo se obtuvieron 4 aislados bacterianos de la rizósfera de Mammillaria magnimamma y Coryphantha radians, los que fueron nombrados como QAP3, QAP19, QAP22 y QAP24 e identificados genéticamente como pertenecientes al género Bacillus. Estos aislados exhibieron in vitro propiedades bioquímicas como solubilización de fosfatos, producción de ácido indolacético y actividad ACC deaminasa, que se relacionan con la promoción del crecimiento de las plantas. Dicha promoción fue ensayada inoculando semillas de M. magnimamma y evaluando luego algunos parámetros. Se encontró que todos los aislados incrementaron la germinación desde un 17% hasta un 34,3% (con respecto a las semillas testigo sin inocular); el aislado QAP24 fue el que presentó el mayor efecto en este sentido y permitió la germinación de todas las semillas viables (84,7%) 3 días antes que en el testigo. La inoculación de este aislado en plantas de Mammillaria zeilmanniana mostró un efecto positivo sobre la floración: en 2 meses dentro del período de un año se detectó un incremento en el número de plantas en floración con respecto a las plantas testigo, de hasta el 31,0% en uno de ellos. Se concluye que los aislados de Bacillus spp. caracterizados poseen potencial para ser empleados en programas de conservación de especies vegetales de zonas áridas.


Cacti are the most representative vegetation of arid zones in Mexico where rainfall is scarce, evapotranspiration is high and soil fertility is low. Plants have developed physiological strategies such as the association with microorganisms in the rhizosphere zone to increase nutrient uptake. In the present work, four bacterial isolates from the rhizosphere of Mammillaria magnimamma and Coryphantha radians were obtained and named as QAP3, QAP19, QAP22 and QAP24, and were genetically identified as belonging to the genus Bacillus, exhibiting in vitro biochemical properties such as phosphate solubilization, indoleacetic acid production and ACC deaminase activity related to plant growth promotion, which was tested by inoculating M. magnimamma seeds. It was found that all isolates increased germination from 17 to 34.3% with respect to the uninoculated control seeds, being QAP24 the one having the greatest effect, accomplishing the germination of viable seeds (84.7%) three days before the control seeds. Subsequently, the inoculation of Mammillari zeilmanniana plants with this isolate showed a positive effect on bloom, registering during two months from a one year period, an increase of up to 31.0% in the number of flowering plants compared to control plants. The characterized Bacillus spp. isolates have potential to be used in conservation programs of plant species from arid zones.


Subject(s)
Bacillus/isolation & purification , Bacillus/classification , Adaptation, Biological/physiology , Conservation of Natural Resources/methods , Cactaceae/microbiology , Rhizosphere , Agricultural Inoculants/growth & development , Germination/drug effects , Flowers/drug effects , Reference Parameters/methods
10.
Braz. j. microbiol ; 47(4): 931-940, Oct.-Dec. 2016. tab, graf
Article in English | LILACS | ID: biblio-828205

ABSTRACT

Abstract Twelve bacterial strains isolated from shrimp farming ponds were screened for their growth activity on chitin as the sole carbon source. The highly chitinolytic bacterial strain was detected by qualitative cup plate assay and tentatively identified to be Cohnella sp. A01 based on 16S rDNA sequencing and by matching the key morphological, physiological, and biochemical characteristics. The cultivation of Cohnella sp. A01 in the suitable liquid medium resulted in the production of high levels of enzyme. The colloidal chitin, peptone, and K2HPO4 represented the best carbon, nitrogen, and phosphorus sources, respectively. Enzyme production by Cohnella sp. A01 was optimized by the Taguchi method. Our results demonstrated that inoculation amount and temperature of incubation were the most significant factors influencing chitinase production. From the tested values, the best pH/temperature was obtained at pH 5 and 70 °C, with Km and V max values of chitinase to be 5.6 mg/mL and 0.87 µmol/min, respectively. Ag+, Co2+, iodoacetamide, and iodoacetic acid inhibited the enzyme activity, whereas Mn2+, Cu2+, Tweens (20 and 80), Triton X-100, and EDTA increased the same. In addition, the study of the morphological alteration of chitin treated by enzyme by SEM revealed cracks and pores on the chitin surface, indicating a potential application of this enzyme in several industries.


Subject(s)
Bacillus/metabolism , Chitinases/metabolism , Phosphorus/metabolism , Temperature , Bacillus/isolation & purification , Bacillus/genetics , Bacillus/ultrastructure , Enzyme Stability/drug effects , Carbon/metabolism , RNA, Ribosomal, 16S/genetics , Kinetics , Chitinases/chemistry , Sequence Analysis, DNA , Enzyme Activation , Hydrogen-Ion Concentration , Ions , Metals , Nitrogen/metabolism
11.
Hig. aliment ; 30(256/257): 163-167, maio/junho 2016. tab
Article in Portuguese | LILACS | ID: biblio-1743

ABSTRACT

Micro-organismos patogênicos são responsáveis por inúmeras doenças veiculadas por alimentos, causando constante preocupação à indústria alimentícia e consumidores. Além disso, há também a preocupação com os possíveis efeitos adversos causados pelos aditivos químicos usados na conservação dos alimentos. Outro problema relacionado aos micro-organismos patogênicos é sua resistência adquirida frente aos antibióticos comuns. A procura por antimicrobianos naturais, presentes em extratos vegetais, tende a ser uma alternativa bastante interessante para todas estas questões. Dessa forma, o objetivo do presente trabalho foi avaliar a atividade antimicrobiana de especiarias, de forma individual e combinada, sobre algumas bactérias. Foram utilizados extratos aquosos de cinco diferentes especiarias, empregados em disco de papel filtro de 6 mm de diâmetro próprios para antibiograma, colocado em placas de Petri com meios de cultura apropriados, semeados previamente com os seguintes micro-organismos: Bacillus cereus, Bacillus subtilis, Salmonella Typhimurium, Samonella Enteritidis e Staphylococcus aureus, posteriormente incubadas à 35ºC/ 24 ­ 48 horas. Através dos resultados obtidos, concluiu-se que o extrato aquoso de sálvia apresentou atividade antimicrobiana significativa sobre S. Typhimurium (halo de 12 mm), o extrato combinado de sálvia e alho apresentou resultado significativo sobre B. cereus e S. aureus (halos de 10mm), este ainda foi inibido significativamente pelos extratos combinados de sálvia e urucum, sálvia e louro, sálvia e gengibre (halos de 10mm).


Pathogenic micro-organisms are responsible for numerous diseases transmitted by foods, causing constant concern to the provision industry and consumers. Besides, there is also the concern with the possible adverse effects caused by the chemical addictive used in the conservation of foods. Another problem related to the pathogenic micro-organisms is about their resistance acquired to the common antibiotics. The search for natural antimicrobials, presents in vegetable extracts, tends to be a quite interesting alternative for all these subjects. In that way, the objective of the present work was to evaluate the antimicrobial activity of spices, in an individual and combined way, on some bacteria. Were used aqueous extracts of five different spices, inserted in paper filter disks of 6 mm diameter own for antibiogram, placed in Petri dishes with appropriate culture means, previously seeded with the following personal micro-organisms: Bacillus cereus, Bacillus subtilis, Salmonella Typhimurium, Samonella Enteritidis and Staphylococcus aureus, subsequently incubated at 35º C/ 24-48 hours. Through the results obtained, it was concluded that the aqueous extract of sage presented significant antimicrobial activity on S. Typhimurium (inhibition zone 12 mm), the combined extract of sage and garlic presented significant result on B. cereus and S. aureus (inhibition zones 10 mm), this still was inhibited significantly by combined extracts of sage and urucum, sage and blond, sage and ginger (inhibition zones 10 mm).


Subject(s)
Food Contamination/prevention & control , Spices/analysis , Food Preservation/methods , Anti-Bacterial Agents , Plants , Salmonella/isolation & purification , Bacillus/isolation & purification , Plant Extracts , Whole Foods
12.
Braz. j. microbiol ; 47(1): 120-128, Jan.-Mar. 2016. tab, graf
Article in English | LILACS | ID: lil-775124

ABSTRACT

Abstract Cyclodextrin glycosyltransferase (CGTase) catalyzes the conversion of starch into non-reducing cyclic sugars, cyclodextrins, which have several industrial applications. This study aimed to establish optimal culture conditions for β-CGTase production by Bacillus sp. SM-02, isolated from soil of cassava industries waste water lake. The optimization was performed by Central Composite Design (CCD) 2, using cassava flour and corn steep liquor as substrates. The maximum production of 1087.9 U mL−1 was obtained with 25.0 g L−1 of cassava flour and 3.5 g L−1 of corn steep after 72 h by submerged fermentation. The enzyme showed optimum activity at pH 5.0 and temperature 55 °C, and maintained thermal stability at 55 °C for 3 h. The enzymatic activity was stimulated in the presence of Mg+2, Ca+2, EDTA, K+, Ba+2 and Na+ and inhibited in the presence of Hg+2, Cu+2, Fe+2 and Zn+2. The results showed that Bacillus sp. SM-02 have good potential for β-CGTase production.


Subject(s)
Bacillus/isolation & purification , Bacillus/metabolism , Culture Media/chemistry , Glucosyltransferases/metabolism , Enzyme Activators/metabolism , Enzyme Inhibitors/analysis , Hydrogen-Ion Concentration , Manihot/metabolism , Soil Microbiology , Temperature , Zea mays/metabolism
13.
Braz. j. microbiol ; 47(1): 1-9, Jan.-Mar. 2016. tab, graf
Article in English | LILACS | ID: lil-775132

ABSTRACT

Abstract This study was conducted to isolate an acid-producing, alkaliphilic bacterium to reduce the alkalinity of cement industry waste (cement kiln dust). Gram-positive isolate KG1 grew well at pH values of 6–12, temperatures of 28–50 °C, and NaCl concentrations of 0–16% and thus was further screened for its potential to reduce the pH of an alkaline medium. Phenotypic characteristics of the KG1 isolate were consistent with those of the genus Bacillus, and the highest level of 16S rRNA gene sequence similarity was found with Bacillus halodurans strain DSM 497 (94.7%). On the basis of its phenotypic characteristics and genotypic distinctiveness from other phylogenetic neighbors belonging to alkaliphilic Bacillus species, the isolated strain was designated B. halodurans strain KG1, with GenBank accession number JQ307184 (= NCIM 5439). Isolate KG1 reduced the alkalinity (by 83.64%) and the chloride content (by 86.96%) of cement kiln dust and showed a potential to be used in the cement industry for a variety of applications.


Subject(s)
Bacillus/growth & development , Bacillus/metabolism , Biotechnology/methods , Industrial Waste , Waste Management/methods , Bacterial Typing Techniques , Bacillus/classification , Bacillus/isolation & purification , Cluster Analysis , Construction Materials , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Hydrogen-Ion Concentration , Molecular Sequence Data , Phylogeny , /genetics , Sequence Analysis, DNA , Sodium Chloride/metabolism , Temperature
14.
Pesqui. vet. bras ; 36(1): 29-32, Jan. 2016. tab
Article in Portuguese | LILACS | ID: lil-777377

ABSTRACT

Otite externa (OE) é o termo utilizado para definir a inflamação do conduto auditivo externo; esta doença possui diversas etiologias, ocorre em várias espécies e é particularmente frequente em cães. Os microrganismos da microbiota residente comumente estão envolvidos na etiopatogenia da OE, sendo apontados como agentes perpetuadores da doença. O objetivo deste estudo foi investigar o perfil microbiológico de cães com conduto auditivo saudável e com otite na região metropolitana do Recife. Com o auxílio de suabes estéreis foram coletadas amostras das orelhas direita e esquerda de 41 cães, sendo 11 com OE e 30 sem OE. Foi realizado o isolamento bacteriano e fúngico das amostras cultivadas; observou-se positividade em 80% dos cães com orelhas saudáveis e presença de mais de um microrganismo em 38 amostras (63,3%); já nos cães com OE, a positividade foi 95,3%, com infecção polimicrobiana em 77,3% das amostras. No que se refere aos gêneros bacterianos, o perfil de isolamento microbiológico foi idêntico entre os cães otopatas e sadios. Os microrganismos isolados foram Staphylococcus sp., Micrococcus, Bacillus sp., Streptococcus sp. e Malassezia sp.


Otitis externa (OE) is the term used to describe inflammation of the external ear canal. This disease has many etiologies, occurs in several species and is particularly common in dogs. The resident microbiota microorganisms are commonly involved in the OE etiopathogenesis, being frequently appointed as perpetuator agents. The aim of this study was to investigate the microbiological profile of dogs with healthy ears and of others with otitis in the metropolitan region of Recife, Pernambuco, Brazil. With the aid of sterile swabs, samples of right and left ear of 41 dogs, 11 with and 30 without OE, were collected. Bacterial and fungal isolation was performed with cultured samples; positivity was observed in 80% of animals with healthy ears, with the presence of more than one microrganism in 38 samples (63.3%), whereas in dogs with OE, the positivity was 95.3% with polymicrobial infection in 77.3% samples. With regard to the genus, the microbiological profile was identical between healthy and diseased dogs. The microrganisms isolated were Staphylococcus sp., Micrococcus, Bacillus sp., Streptococcus sp. and Malassezia sp.


Subject(s)
Animals , Dogs , Malassezia/isolation & purification , Ear Canal/microbiology , Otitis Externa/microbiology , Staphylococcus/isolation & purification , Bacillus/isolation & purification , Micrococcus/isolation & purification , Ear Diseases/veterinary , Streptococcus/isolation & purification
15.
Braz. j. microbiol ; 46(4): 1183-1191, Oct.-Dec. 2015. tab, graf
Article in English | LILACS | ID: lil-769666

ABSTRACT

Abstract Adhirasam is a cereal based, doughnut shaped, deep fried dessert consumed in the southern regions of India. The dough used to prepare adhirasam is fermented and contains rice flour and jaggery. The aim of the present study was to characterize the cultivable bacteria associated with this fermented dough and to identify a suitable starter culture for the production of quality adhirasam. In total, one hundred and seventy bacterial isolates were recovered from de Man Rogosa Sharp (MRS) agar, nutrient agar, lysogeny agar and tryptic soy agar media. Out of the 170 bacterial isolates, sixteen isolates were selected based on their ability to tolerate glucose and sucrose. All the bacterial isolates tolerated 15% glucose and 30% sucrose. Analyses of 16S rDNA gene sequences of the bacterial isolates showed that the dominant cultivable bacteria were members of the genus Bacillus. These strains were further used as starters and tested for their ability to ferment rice flour with jaggery to produce adhirasam dough. Organoleptic evaluation was carried out to choose the best starter strain. Adhirasam prepared from Bacillus subtilis isolates S4-P11, S2-G2-A1 and S1-G15, Bacillus tequilensis isolates S2-H16, S3-P9, S3-G10 and Bacillus siamensis isolate S2-G13 were highly acceptable to consumers. Adhirasam prepared using these starter cultures had superior product characteristics such as softness in texture, flavor and enhanced aroma and sweet taste.


Subject(s)
Humans , Bacillus/growth & development , Bacillus/metabolism , Food Microbiology , Bacterial Typing Techniques , Bacillus/classification , Bacillus/isolation & purification , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , India , Oryza/metabolism , /genetics , Sequence Analysis, DNA
16.
Braz. j. microbiol ; 46(4): 977-989, Oct.-Dec. 2015. tab, graf
Article in English | LILACS | ID: lil-769669

ABSTRACT

Abstract A total of 48 endophytic bacteria were isolated from surface-sterilized tissues of the medicinal plant Lonicera japonica, which is grown in eastern China; six strains were selected for further study based on their potential ability to promote plant growth in vitro (siderophore and indoleacetic acid production). The bacteria were characterized by phylogenetically analyzing their 16S rRNA gene similarity, by examining their effect on the mycelial development of pathogenic fungi, by testing their potential plant growth-promoting characteristics, and by measuring wheat growth parameters after inoculation. Results showed that the number of endophytic bacteria in L. japonica varied among different tissues, but it remained relatively stable in the same tissues from four different plantation locations. Among the three endophytic strains, strains 122 and 124 both had high siderophore production, with the latter showing the highest phosphate solubilization activity (45.6 mg/L) and aminocyclopropane-1-carboxylic acid deaminase activity (47.3 nmol/mg/h). Strain 170 had the highest indoleacetic acid (IAA) production (49.2 mg/L) and cellulase and pectinase activities. After inoculation, most of the six selected isolates showed a strong capacity to promote wheat growth. Compared with the controls, the increase in the shoot length, root length, fresh weight, dry weight, and chlorophyll content was most remarkable in wheat seedlings inoculated with strain 130. The positive correlation between enzyme (cellulose and pectinase) activity and inhibition rate on Fusarium oxysporum, the IAA production, and the root length of wheat seedlings inoculated with each tested endophytic strain was significant in regression analysis. Deformity of pathogenic fungal mycelia was observed under a microscope after the interaction with the endophytic isolates. Such deformity may be directly related to the production of hydrolytic bacterial enzymes (cellulose and pectinase). The six endophytic bacterial strains were identified to be Paenibacillus and Bacillus strains based on the results of 16S rRNA gene sequencing analysis and their physiological and biochemical characteristics. Results indicate the promising application of endophytic bacteria to the biological control of pathogenic fungi and the improvement of wheat crop growth.


Subject(s)
Bacillus/classification , Bacillus/genetics , Bacillus/growth & development , Bacillus/isolation & purification , Bacillus/metabolism , Bacillus/microbiology , China/classification , China/genetics , China/growth & development , China/isolation & purification , China/metabolism , China/microbiology , Endophytes/classification , Endophytes/genetics , Endophytes/growth & development , Endophytes/isolation & purification , Endophytes/metabolism , Endophytes/microbiology , Indoleacetic Acids/classification , Indoleacetic Acids/genetics , Indoleacetic Acids/growth & development , Indoleacetic Acids/isolation & purification , Indoleacetic Acids/metabolism , Indoleacetic Acids/microbiology , Lonicera/classification , Lonicera/genetics , Lonicera/growth & development , Lonicera/isolation & purification , Lonicera/metabolism , Lonicera/microbiology , Molecular Sequence Data/classification , Molecular Sequence Data/genetics , Molecular Sequence Data/growth & development , Molecular Sequence Data/isolation & purification , Molecular Sequence Data/metabolism , Molecular Sequence Data/microbiology , Paenibacillus/classification , Paenibacillus/genetics , Paenibacillus/growth & development , Paenibacillus/isolation & purification , Paenibacillus/metabolism , Paenibacillus/microbiology , Phylogeny/classification , Phylogeny/genetics , Phylogeny/growth & development , Phylogeny/isolation & purification , Phylogeny/metabolism , Phylogeny/microbiology , Plant Roots/classification , Plant Roots/genetics , Plant Roots/growth & development , Plant Roots/isolation & purification , Plant Roots/metabolism , Plant Roots/microbiology , Siderophores/classification , Siderophores/genetics , Siderophores/growth & development , Siderophores/isolation & purification , Siderophores/metabolism , Siderophores/microbiology , Triticum/classification , Triticum/genetics , Triticum/growth & development , Triticum/isolation & purification , Triticum/metabolism , Triticum/microbiology
17.
Braz. j. microbiol ; 46(4): 1111-1118, Oct.-Dec. 2015. tab, graf
Article in English | LILACS | ID: lil-769642

ABSTRACT

Abstract In the present work, twelve bacilli were isolated from four different regions of human skin from Bela population of Nagpur district, India. The isolated bacilli were identified by their morphological, cultural and biochemical characteristics. Seven isolates were Gram negative rods, out of which five were belong to genus Pseudomonas. Three among the five Gram positive isolates were identified as Dermabactor and the remaining two Bacillus. Their antimicrobial susceptibility profile was determined by Kirby-Bauer disc diffusion method. The isolates showed resistance to several currently used broad-spectrum antibiotics. The Dermabactor genus was resistant to vancomycin, although it was earlier reported to be susceptible. Imipenem was found to be the most effective antibiotic for Pseudomonas while nalidixic acid, ampicillin and tetracycline were ineffective. Isolates of Bacillus displayed resistance to the extended spectrum antibiotics cephalosporin and ceftazidime. Imipenem, carbenicillin and ticarcillin were found to be the most effective antibiotics as all the investigated isolates were susceptible to them. Antibiotic resistance may be due to the overuse or misuse of antibiotics during the treatment, or following constant exposure to antibiotic-containing cosmetic formulations.


Subject(s)
Adolescent/classification , Adolescent/drug effects , Adolescent/genetics , Adolescent/isolation & purification , Adolescent/microbiology , Adolescent/pharmacology , Adult/classification , Adult/drug effects , Adult/genetics , Adult/isolation & purification , Adult/microbiology , Adult/pharmacology , Anti-Bacterial Agents/classification , Anti-Bacterial Agents/drug effects , Anti-Bacterial Agents/genetics , Anti-Bacterial Agents/isolation & purification , Anti-Bacterial Agents/microbiology , Anti-Bacterial Agents/pharmacology , Bacillus/classification , Bacillus/drug effects , Bacillus/genetics , Bacillus/isolation & purification , Bacillus/microbiology , Bacillus/pharmacology , Female/classification , Female/drug effects , Female/genetics , Female/isolation & purification , Female/microbiology , Female/pharmacology , Healthy Volunteers/classification , Healthy Volunteers/drug effects , Healthy Volunteers/genetics , Healthy Volunteers/isolation & purification , Healthy Volunteers/microbiology , Healthy Volunteers/pharmacology , Humans/classification , Humans/drug effects , Humans/genetics , Humans/isolation & purification , Humans/microbiology , Humans/pharmacology , Male/classification , Male/drug effects , Male/genetics , Male/isolation & purification , Male/microbiology , Male/pharmacology , Microbial Sensitivity Tests/classification , Microbial Sensitivity Tests/drug effects , Microbial Sensitivity Tests/genetics , Microbial Sensitivity Tests/isolation & purification , Microbial Sensitivity Tests/microbiology , Microbial Sensitivity Tests/pharmacology , Middle Aged/classification , Middle Aged/drug effects , Middle Aged/genetics , Middle Aged/isolation & purification , Middle Aged/microbiology , Middle Aged/pharmacology , Skin/classification , Skin/drug effects , Skin/genetics , Skin/isolation & purification , Skin/microbiology , Skin/pharmacology , Young Adult/classification , Young Adult/drug effects , Young Adult/genetics , Young Adult/isolation & purification , Young Adult/microbiology , Young Adult/pharmacology
18.
Braz. j. microbiol ; 46(3): 659-666, July-Sept. 2015. ilus
Article in English | LILACS | ID: lil-755822

ABSTRACT

Ten bacterial strains that utilize cyanide (CN) as a nitrogen source were isolated from cassava factory wastewater after enrichment in a liquid media containing sodium cyanide (1 mM) and glucose (0.2% w/v). The strains could tolerate and grow in cyanide concentrations of up to 5 mM. Increased cyanide levels in the media caused an extension of lag phase in the bacterial growth indicating that they need some period of acclimatisation. The rate of cyanide removal by the strains depends on the initial cyanide and glucose concentrations. When initial cyanide and glucose concentrations were increased up to 5 mM, cyanide removal rate increased up to 63 and 61 per cent by Bacillus pumilus and Pseudomonas putida. Metabolic products such as ammonia and formate were detected in culture supernatants, suggesting a direct hydrolytic pathway without an intermediate formamide. The study clearly demonstrates the potential of aerobic treatment with cyanide degrading bacteria for cyanide removal in cassava factory wastewaters.

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Subject(s)
Biodegradation, Environmental , Bacillus/metabolism , Cyanides/metabolism , Pseudomonas putida/metabolism , Waste Water/chemistry , Ammonia/metabolism , Bacillus/isolation & purification , Bioreactors/microbiology , Formates/metabolism , Glucose/metabolism , India , Manihot , Pseudomonas putida/isolation & purification , /genetics
19.
Braz. j. microbiol ; 46(2): 347-354, Apr-Jun/2015. tab, graf
Article in English | LILACS | ID: lil-749729

ABSTRACT

Halophilic microorganisms are able to grow in the presence of salt and are also excellent source of enzymes and biotechnological products, such as exopolysaccharides (EPSs) and polyhydroxyalkanoates (PHAs). Salt-tolerant bacteria were screened in the Organic Composting Production Unit (OCPU) of São Paulo Zoological Park Foundation, which processes 4 ton/day of organic residues including plant matter from the Atlantic Rain Forest, animal manure and carcasses and mud from water treatment. Among the screened microorganisms, eight halotolerant bacteria grew at NaCl concentrations up to 4 M. These cultures were classified based on phylogenetic characteristics and comparative partial 16S rRNA gene sequence analysis as belonging to the genera Staphylococcus, Bacillus and Brevibacterium. The results of this study describe the ability of these halotolerant bacteria to produce some classes of hydrolases, namely, lipases, proteases, amylases and cellulases, and biopolymers. The strain characterized as of Brevibacterium avium presented cellulase and amylase activities up to 4 M NaCl and also produced EPSs and PHAs. These results indicate the biotechnological potential of certain microorganisms recovered from the composting process, including halotolerant species, which have the ability to produce enzymes and biopolymers, offering new perspectives for environmental and industrial applications.


Subject(s)
Bacillus/isolation & purification , Biological Products/analysis , Brevibacterium/isolation & purification , Hydrolases/analysis , Soil Microbiology , Sodium Chloride/metabolism , Staphylococcus/isolation & purification , Brazil , Bacillus/classification , Bacillus/genetics , Bacillus/metabolism , Brevibacterium/classification , Brevibacterium/genetics , Brevibacterium/metabolism , Cluster Analysis , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Molecular Sequence Data , Phylogeny , /genetics , Sequence Analysis, DNA , Soil , Staphylococcus/classification , Staphylococcus/genetics , Staphylococcus/metabolism
20.
Braz. j. microbiol ; 46(2): 455-464, Apr-Jun/2015. tab, graf
Article in English | LILACS | ID: lil-749744

ABSTRACT

Biomineralization is a known natural phenomenon associated with a wide range of bacterial species. Bacterial-induced calcium carbonate precipitation by marine isolates was investigated in this study. Three genera of ureolytic bacteria, Sporosarcina sp., Bacillus sp. and Brevundimonas sp. were observed to precipitate calcium carbonate minerals. Of these species, Sporosarcina sp. dominated the cultured isolates. B. lentus CP28 generated higher urease activity and facilitated more efficient precipitation of calcium carbonate at 3.24 ± 0.25 × 10−4 mg/cell. X-ray diffraction indicated that the dominant calcium carbonate phase was calcite. Scanning electron microscopy showed that morphologies of the minerals were dominated by cubic, rhombic and polygonal plate-like crystals. The dynamic process of microbial calcium carbonate precipitation revealed that B. lentus CP28 precipitated calcite crystals through the enzymatic hydrolysis of urea, and that when ammonium ion concentrations reached 746 mM and the pH reached 9.6, that favored calcite precipitation at a higher level of 96 mg/L. The results of this research provide evidence that a variety of marine bacteria can induce calcium carbonate precipitation, and may influence the marine carbonate cycle in natural environments.


Subject(s)
Bacillus/isolation & purification , Calcium Carbonate/metabolism , Caulobacteraceae/isolation & purification , Geologic Sediments/microbiology , Sporosarcina/isolation & purification , Ammonium Compounds/metabolism , Bacillus/classification , Bacillus/genetics , Bacillus/metabolism , Cluster Analysis , Caulobacteraceae/classification , Caulobacteraceae/genetics , Caulobacteraceae/metabolism , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , Hydrogen-Ion Concentration , Microscopy, Electron, Scanning , Molecular Sequence Data , Phylogeny , /genetics , Sequence Analysis, DNA , Sporosarcina/classification , Sporosarcina/genetics , Sporosarcina/metabolism , Urea/metabolism , X-Ray Diffraction
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