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Braz. j. microbiol ; 49(2): 210-211, Apr.-June 2018.
Artículo en Inglés | LILACS | ID: biblio-889231

RESUMEN

Abstract Paraburkholderia tropica (syn Burkholderia tropica) are nitrogen-fixing bacteria commonly found in sugarcane. The Paraburkholderia tropica strain Ppe8 is part of the sugarcane inoculant consortium that has a beneficial effect on yield. Here, we report a draft genome sequence of this strain elucidating the mechanisms involved in its interaction mainly with Poaceae. A genome size of approximately 8.75 Mb containing 7844 protein coding genes distributed in 526 subsystems was de novo assembled with ABySS and annotated by RAST. Genes related to the nitrogen fixation process, the secretion systems (I, II, III, IV, and VI), and related to a variety of metabolic traits, such as metabolism of carbohydrates, amino acids, vitamins, and proteins, were detected, suggesting a broad metabolic capacity and possible adaptation to plant association.


Asunto(s)
Genoma Bacteriano , Burkholderiaceae/genética , Endófitos/genética , Proteínas Bacterianas/genética , Análisis de Secuencia de ADN , Biología Computacional , Saccharum/microbiología , Burkholderiaceae/aislamiento & purificación , Redes y Vías Metabólicas/genética , Anotación de Secuencia Molecular , Endófitos/aislamiento & purificación
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