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1.
Frontiers of Medicine ; (4): 939-956, 2023.
Article Dans Anglais | WPRIM | ID: wpr-1010802

Résumé

A small proportion of mononuclear diploid cardiomyocytes (MNDCMs), with regeneration potential, could persist in adult mammalian heart. However, the heterogeneity of MNDCMs and changes during development remains to be illuminated. To this end, 12 645 cardiac cells were generated from embryonic day 17.5 and postnatal days 2 and 8 mice by single-cell RNA sequencing. Three cardiac developmental paths were identified: two switching to cardiomyocytes (CM) maturation with close CM-fibroblast (FB) communications and one maintaining MNDCM status with least CM-FB communications. Proliferative MNDCMs having interactions with macrophages and non-proliferative MNDCMs (non-pMNDCMs) with minimal cell-cell communications were identified in the third path. The non-pMNDCMs possessed distinct properties: the lowest mitochondrial metabolisms, the highest glycolysis, and high expression of Myl4 and Tnni1. Single-nucleus RNA sequencing and immunohistochemical staining further proved that the Myl4+Tnni1+ MNDCMs persisted in embryonic and adult hearts. These MNDCMs were mapped to the heart by integrating the spatial and single-cell transcriptomic data. In conclusion, a novel non-pMNDCM subpopulation with minimal cell-cell communications was unveiled, highlighting the importance of microenvironment contribution to CM fate during maturation. These findings could improve the understanding of MNDCM heterogeneity and cardiac development, thus providing new clues for approaches to effective cardiac regeneration.


Sujets)
Animaux , Souris , Diploïdie , Coeur , Myocytes cardiaques/métabolisme , Communication cellulaire , Analyse de profil d'expression de gènes , Mitochondries , Régénération , Mammifères/génétique
2.
Genomics, Proteomics & Bioinformatics ; (4): 131-144, 2003.
Article Dans Anglais | WPRIM | ID: wpr-339514

Résumé

The E (envelope) protein is the smallest structural protein in all coronaviruses and is the only viral structural protein in which no variation has been detected. We conducted genome sequencing and phylogenetic analyses of SARS-CoV. Based on genome sequencing, we predicted the E protein is a transmembrane (TM) protein characterized by a TM region with strong hydrophobicity and alpha-helix conformation. We identified a segment (NH2-_L-Cys-A-Y-Cys-Cys-N_-COOH) in the carboxyl-terminal region of the E protein that appears to form three disulfide bonds with another segment of corresponding cysteines in the carboxyl-terminus of the S (spike) protein. These bonds point to a possible structural association between the E and S proteins. Our phylogenetic analyses of the E protein sequences in all published coronaviruses place SARS-CoV in an independent group in Coronaviridae and suggest a non-human animal origin.


Sujets)
Séquence d'acides aminés , Séquence nucléotidique , Analyse de regroupements , Codon , Génétique , Composants de gène , Génome viral , Glycoprotéines membranaires , Métabolisme , Protéines membranaires , Génétique , Métabolisme , Données de séquences moléculaires , Phylogenèse , Conformation des protéines , Virus du SRAS , Génétique , Alignement de séquences , Analyse de séquence d'ADN , Similitude de séquences , Glycoprotéine de spicule des coronavirus , Protéines de l'enveloppe virale , Génétique , Métabolisme
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