Seasonality, soil attributes and root biomass in cerrado, cerradão and forest environments, western Amazon

The Amazon rainforest region presents a phytophysiognomy that ranges from savannas to cerrados, all of them intimately associated to climate and soil characteristics. Evidence has been given that plant growth and development are affected by soil quality and seasonality, thus making it crucial to understand them and how they are related to each other in order to grasp the dynamics of the whole ecosystem. In this context, the goal of this research was to assess how seasonality, soil attributes, and root system biomass are related in natural cerrado, cerradão, and forest areas in southern Amazonas State, in Brazil. Soil samples were collected during dry (June/2018) and rainy (December/2018) seasons from three different layers 0.00­0.05m; 0.05­0.15m, and 0.15­0.30m deep. In each area ten sampling points were randomly chosen. Two kinds of soil samples were collected: the first using 4.0 cm height by 5.1cm internal-diameter soil sample rings; and the second were intact soil lumps. Physical and Chemical soil attributes assessed were macro-porosity (MaP), micro-porosity (MiP), total porosity (TP), soil density (SD), aggregates texture and stability (GMD and WAR), gravimetric humidity (HG), organic carbon (OC), exchangeable aluminum (Al3+), potential acidity (H+Al), sum of bases (SB), cation exchange capacity (CEC), and root biomass (RB). All data were analysed via Tukey t test and student T test to compare results between seasons and areas. Increasing vegetation density (cerrado < cerradão < forest) was followed by an increment in CEC and OC, showing the importance of these attributes to maintaining biodiversity in environments. In amazon cerrado, rainy season as well a sandier soil textures provided favourable conditions to the growth and development of plants' root system. Soil attributes were little affected by seasonality, that had greater effect on MiP, TP, SD, and OC, leading to lesser values for these variables during rainy season.

Molecular survey of tick-borne pathogens in small mammals from Brazilian Amazonia / Levantamento molecular de patógenos transmitidos por carrapatos em pequenos mamíferos da Amazônia brasileira

Abstract Small non-volant mammals (marsupials and small rodents) were captured at three different timepoints from 23 forest fragments across three municipalities (Alta Floresta, Sinop and Cláudia) covering the Amazonian biome of the Mato Grosso State in Midwestern Brazil. The animal tissues (liver and spleen) and blood were screened using molecular tools for the detection of Babesia, Coxiella, Cytauxzoon, Hepatozoon, Theileria, and Anaplasmataceae agents. A total of 230 specimens (78 rodents and 152 marsupials) were trapped. Hepatozoon and Piroplasmorida agents were detected in the common opossums (Didelphis marsupialis). In turn, all samples (blood, liver, or spleen) collected from the small mammals were negative for the genus Coxiella and the family Anaplasmataceae, as detected by polymerase chain reaction (PCR). Phylogenetic analyses inferred from partial sequences of the 18S rRNA gene highlighted the occurrence of new Hepatozoon and Piroplasmorida haplotypes. Future studies determining the role of common opossum (D. marsupialis) in the epidemiological cycles of Hepatozoon and Babesia under natural conditions in the Amazonian biome are necessary.

Resumo Pequenos mamíferos não voadores (marsupiais e pequenos roedores) foram capturados em três diferentes períodos, ao longo de 23 fragmentos florestais de três municípios (Alta Floresta, Sinop e Cláudia), localizados no bioma amazônico do Estado de Mato Grosso, no centro-oeste do Brasil. Os tecidos dos animais (fígado e baço) e sangue foram selecionados e submetidos a ensaios moleculares para a detecção do DNA de Babesia, Coxiella, Cytauxzoon, Hepatozoon, Theileria e agentes Anaplasmataceae. Um total de 230 espécimes (78 roedores e 152 marsupiais) foram capturados. Hepatozoon e agentes Piroplasmorida foram detectados em gambás (Didelphis marsupialis). Ao contrário, todas as amostras (sangue, fígado ou baço) coletadas dos pequenos mamíferos foram negativas para o gênero Coxiella e a família Anaplasmataceae, conforme detectado pela reação em cadeia da polimerase (PCR). Análises filogenéticas inferidas pelas sequências parciais do gene 18S rRNA evidenciaram a ocorrência de novos haplótipos de Hepatozoon e Piroplasmorida. Futuros estudos determinando a importância do gambá-comun (D. marsupialis) nos ciclos epidemiológicos de Hepatozoon e Babesia em condições naturais, no bioma amazônico, são necessários.