Is a non-synonymous SNP in the HvAACT1 coding region associated with acidic soil tolerance in barley?

Abstract The barley HvAACT1 gene codes for a citrate transporter associated with tolerance to acidic soil. In this report, we describe a single nucleotide polymorphism (SNP) in the HvAACT1 coding region that was detected as T-1,198 (in genotypes with lower root growth on acidic soil) or G-1,198 (greater root growth) and resulted in a single amino acid change (L/V-172). Molecular dynamic analysis predicted that HvAACT1 proteins with L or V-172 were stable, although the substitution led to structural changes within the protein. To evaluate the effect of the SNP on tolerance to acidic soil, barley accessions were separated into haplotypes based on the presence of a 1 kb insertion in the HvAACT1 promoter and a 21 bp insertion/deletion. These markers and the SNP-1,198 allowed the identification of five haplotypes. Short-term soil experiments showed no difference in root growth for most of the accessions containing the 21 bp insertion and T or G-1,198. In contrast, genotypes showing both the 21 bp deletion and G-1,198, with one of them having the 1 kb insertion, showed greater root growth. These results indicate that the SNP was not advantageous or deleterious when genotypes from the same haplotype were compared. The occurrence of the SNP was highly correlated with the 21 bp insertion/deletion that, together with the 1 kb insertion, explained most of the barley tolerance to acidic soil.

Resposta do cafeeiro à inoculação de fungos micorrízicos arbusculares, em latossolo vermelho, do cerrado / Response of coffee plants colonized inoculation with arbuscular mucorrhizal fungi, red latosol, in cerrado

O objetivo deste trabalho foi verificar a resposta de dois cultivares de café (sensível e tolerante ao alumínio - Al), à inoculação de Gigaspora margarita e Glomus etunicatum, em Latossolo Vermelho do cerrado, com diferentes saturações por bases (30, 45 e 53 %). O experimento foi realizado em casa de vegetação, com delineamento inteiramente casualizado e em esquema fatorial 2x3x3, consistindo de 2 cultivares de (tolerante e sensível a Al), 3 tratamentos com micorriza (com inoculação de duas espécies de FMA e sem inoculação) e 3 níveis de saturação por bases do solo (V%), com cinco repetições por tratamento. As variáveis foram: altura da planta, diâmetro do caule, área foliar, massa da matéria seca da parte aérea, massa da matéria fresca de raiz, atividade da redutase do nitrato, teor de clorofila, colonização micorrízica e número de esporos. Os isolados de micorrizas proporcionaram maior crescimento do cafeeiro em solo ácido com alta concentração de Al, porém esta resposta foi verificada para ambos os cultivares quando colonizados por G. margarita. Os cultivares avaliados não mostraram diferenças quanto à tolerância ao Al quando não micorrizados.

The aim of this study was evaluate the response of two coffee cultivars (tolerant and sensitive to aluminum - Al), inoculated or not by two arbuscular mycorriza fungi (AMF), Gigaspora margarita and Glomus etunicatum, in cerrado Oxisol, with different base saturation. This experiment was conducted under greenhouse conditions, with a complete randomized design, in a 2x3x2 factorial scheme, consisting of 2 cultivars (tolerante and sensitive to Al), 3 treatments with mycorrhizal (inoculated with two species of AMF and without inoculation) and 3 levels of soil base saturation (30, 45 and 53 V%), with five replicates per treatment. The variables were: plant height, stem diameter, leaf area, shoot dry weight, root fresh weight, nitrate reductase activity, chlorophyll concentration, root colonization and number of AMF spores. Mycorrhizae isolates promoted greater response of coffee plants, in acid soil with high concentration of Al, but this response was observed for both cultivars when plants were colonized by G. margarita. The cultivars evaluated showed no differences in Al tolerance when non inoculated.

Aluminium localization and toxicity symptoms related to root growth inhibition in rice (Oryza sativa L.) seedlings.

We correlated root growth inhibition with aluminium (Al3+) localization and toxicity symptoms in rice roots using seedlings of two genotypes (tolerant and sensitive) that were exposed to different AlCl3 concentrations. Al3+ localization was evaluated by hematoxylin in primary roots and by morin in cross-sections of the root tips. Neutral invertase enzyme activity and callose (1→3, β-D-glucan) accumulation were observed and compared with Al3+ accumulation sites. Root growth was inhibited by Al3+ in a concentration-specific manner and proportional to the increase of hematoxylin staining, being more pronounced in the sensitive genotype. Morin staining showed the presence of Al3+ deep within the roots of the sensitive genotype, indicating that the metal was able to penetrate beyond the first few cell layers. In the tolerant genotype, Al3+ penetration was restricted to the first two cell layers. Ruptures in exodermis and epidermis layers by lateral root protrusions in both genotypes allowed Al3+ to enter into the roots. More intense activity of invertase in roots of the tolerant genotype was also observed, which could be related to greater root growth of this cultivar when submitted to Al3+ stress. Moreover, Al3+-induced callose accumulation was a late response occurring in the same areas where Al3+ was present.