Towards a more healthy conservation paradigm: integrating disease and molecular ecology to aid biological conservation†

Parasites, and the diseases they cause, are important from an ecological and evolutionary perspective because they can negatively affect host fitness and can regulate host populations. Consequently, conservation biology has long recognized the vital role that parasites can play in the process of species endangerment and recovery. However, we are only beginning to understand how deeply parasites are embedded in ecological systems, and there is a growing recognition of the important ways in which parasites affect ecosystem structure and function. Thus, there is an urgent need to revisit how parasites are viewed from a conservation perspective and broaden the role that disease ecology plays in conservation-related research and outcomes. This review broadly focusses on the role that disease ecology can play in biological conservation. Our review specifically emphasizes on how the integration of tools and analytical approaches associated with both disease and molecular ecology can be leveraged to aid conservation biology. Our review first concentrates on diseasemediated extinctions and wildlife epidemics. We then focus on elucidating how host–parasite interactions has improved our understanding of the eco-evolutionary dynamics affecting hosts at the individual, population, community and ecosystem scales. We believe that the role of parasites as drivers and indicators of ecosystem health is especially an exciting area of research that has the potential to fundamentally alter our view of parasites and their role in biological conservation. The review concludes with a broad overview of the current and potential applications of modern genomic tools in disease ecology to aid biological conservation

A review of longnose skates Zearaja chilensis and Dipturus trachyderma (Rajiformes: Rajidae) / Una revisión sobre las rayas de hocico largo Zearaja chilensis y Dipturus trachyderma (Rajiformes: Rajidae) / Urna revisão das raías longnose Zearaja chilensis e Dipturus trachyderma (Rajiformes: Rajidae)

Longnose skates may have a high intrinsic vulnerability among fishes due to their large body size, slow growth rates and relatively low fecundity, and their exploitation as fisheries target-species places their populations under considerable pressure. These skates are found circumglobally in subtropical and temperate coastal waters. Although longnose skates have been recorded for over 150 years in South America, the ability to assess the status of these species is still compromised by critical knowledge gaps. Based on a review of 185 publications, a comparative synthesis of the biology and ecology was conducted on two commercially important elasmobranchs in South American waters, the yellownose skate Zearaja chilensis and the roughskin skate Dipturus trachyderma, in order to examine and compare their taxonomy, distribution, fisheries, feeding habitats, reproduction, growth and longevity. There has been a marked increase in the number of published studies for both species since 2000, and especially after 2005, although some research topics remain poorly understood. Considering the external morphological similarities of longnose skates, especially when juvenile, and the potential niche overlap in both, depth and latitude it is recommended that reproductive seasonality, connectivity and population structure be assessed to ensure their long-term sustainability.

Las rayas de nariz larga tienen una alta vulnerabilidad intrínseca entre los peces, debido a su gran tamaño corporal, bajas tasas de crecimiento y relativamente baja fecundidad; por otra parte, el hecho de ser blanco de explotación pesquera coloca a su población bajo una presión considerable. Las rayas de nariz larga se encuentran alrededor del mundo en aguas costeras subtropicales y templadas. Aunque se han registrado a lo largo de 150 años en Suramérica, los críticos vacíos de información que aún persisten comprometen la capacidad de determinar el estatus de estas especies. Con base en una revisión de 185 publicaciones, se realizó una síntesis comparativa de la biología y ecología de dos de las especies de elasmobranquios comerciales de aguas suramericanas: la raya volantín (Zearaja chilensis) y la raya espinosa (Dipturus trachyderma). Se examinaron y compararon su taxonomía, distribución, hábitos alimenticios, reproducción, crecimiento, longevidad y explotación pesquera. El número de estudios publicados sobre ambas especies se ha incrementado considerablemente desde 2000 y especialmente después de 2005, aunque algunos tópicos de investigación permanecen poco entendidos. Considerando la similitud morfológica externa de las rayas de nariz larga, especialmente en sus estadios juveniles, y que su nicho potencial se superpone tanto en profundidad como en latitud, se recomienda determinar su estacionalidad reproductiva, con el fin de asegurar su sostenibilidad en el largo plazo.

Raias longnose podem ter uma elevada vulnerabilidade intrínseca entre os peixes, devido ao seu grande tamanho de corpo, taxas lentas de crescimento e fecundidade relativamente baixa, e sua exploraclo como especies alvo de pesca coloca suas populacóes sob considerável pressao. Sao encontradas ao redor do mundo em águas costeiras subtropicais e temperadas. Embora raias longnose hajam sido registradas por mais de 150 anos na América do Sul, a capacidade de avaliar o status dessas espécies ainda é comprometida por lacunas críticas de conhecimento. Com base em uma revisao de 185 publicacóes, uma síntese comparativa da biologia e ecologia foi realizada uma síntese comparativa da biología e ecología de duas espécies de elasmobranquios comerciais de águas sul-americanas, a raia nariz-amarelo (Zearaja chilensis) e a raia pele-áspera (Dipturus trachyderma); com vistas a analisar e comparar a sua taxonomía, distribuicao, pescas, habitats de alimentacao, reprodujo, crescimento e longevidade. Houve um aumento acentuado no número de estudos publicados para ambas as espécies desde 2000, e especialmente depois de 2005, embora alguns tópicos de investiga^ão permanecam pouco compreendidos. Considerando as similaridades morfológicas externas das raias longnose, especialmente quando jovens, e a potencial sobreposição de nichos ocupados tanto em relaclo a profundidade quanto a latitude, recomenda-se que a sazonalidade reprodutiva, seja avaliada para assegurar a sua sustentabilidade em longo prazo.

Population Status Andconservation Prioritization of Some Threatened Medicinal Plants of Kashmir Himalayas.

Himalaya is credited all over the world as a treasure of medicinal and aromatic plants, which in turn prove as treasures of bioactive agents. These medicinal plants taking refuge in the sub alpine and alpine zones are facing the brunt of varied threats. Strategies have been proposed by various environmentalists to conserve biodiversity at regional, national and global levels. Assessment of plant populations is one of the basic activities of conservation biology that can be mainly valuable for sustaining species with minor populations. In the present study, threat status of the 6 medicinal plant species (Arnebia benthamiI Wall. Ex G. Don, Meconopsis aculeate Royle, Rheum webbianum Royle, Aconitum heterophyllum Wallish Ex Royle, Podophyllum hexandrum Royle and Aquilegia fragrans Benth.) have been assessed in accordance with IUCN Red List Categories and Criteria 2010 version 8.1 following Guidelines for Application of IUCN Red List Criteria at Regional Levels 2003 version 3.0criteria. Out of 6 species, 2 were categorized as vulnerable, 3 species as endangered and 1 species as critically endangered. The three factors of over exploitation, overgrazing and habitat degradation have been known as main threats to the medicinal plants. Consequently, monitoring of population and habitats, development of conservative protocol and establishment of species in-situ conditions has been proposed.

Life history, distribution and abundance of the giant earthworm Rhinodrilus alatus RIGHI 1971: conservation and management implications / História de vida, distribuição e abundância do minhocuçu Rhinodrilus alatus RIGHI 1971: implicações para sua conservação e manejo

Rhinodrilus alatus is an endemic giant earthworm of the Brazilian Cerrado hotspot used as live bait for about 80 years. The goal of this study was to gather ecological data about this species, which will support the establishment of management strategies. The life history, distribution and abundance of R. alatus were investigated in Cerrado, pastures and Eucalyptus plantation areas following the harvesting activities of the local extractors of this species. We found that this earthworm is abundant in all of the sampled areas, showing its resilience to land-use conversion. The Capture Per Unit Effort was 4.4 ± 5 individuals per 100 metres of transect and 5.6 ± 3 individuals per hour. The earthworm's annual cycle is markedly seasonal, with an aestivation period throughout the driest and coldest season of the year. Significant differences in the length and diameter of the body and in the diameter and depth of the aestivation chambers were found between the juveniles and adults. The distribution range of the species was expanded from two to 17 counties. The life history, abundance, distribution and resilience of R. alatus to certain perturbations are key elements to be considered in conservation and management strategies for this species.

Rhinodrilus alatus é um minhocuçu endêmico do hotspot Cerrado, utilizado como isca viva por cerca de 80 anos. O objetivo deste estudo foi obter informações ecológicas sobre essa espécie, as quais servirão para o estabelecimento de estratégias para seu manejo. A história de vida, a distribuição e a abundância de R. alatus foram investigados em áreas de Cerrado, pastagens e plantações de Eucalyptus, acompanhando sua extração pela comunidade local. Rhinodrilus alatus foi abundante em todas as áreas amostradas, mostrando-se resiliente à conversão do Cerrado em outros usos. A Captura por Unidade de Esforço foi de 4.4 ± 5 indivíduos por 100 metros de transecto e 5.6 ± 3 indivíduos por hora. O ciclo anual do minhocuçu é marcadamente sazonal, apresentando estivação no período mais frio e seco do ano. Jovens e adultos diferiram significativamente no comprimento e diâmetro do corpo e no diâmetro e profundidade da câmara de estivação. A distribuição da espécie foi expandida de dois para 17 municípios. A história de vida, a abundância, a distribuição e resiliência de R. alatus por certos distúrbios são elementos chave a serem considerados nas estratégias de conservação e manejo dessa espécie.

The effect of highly variable topography on the spatial distribution of Aniba perutilis (Lauraceae) in the Colombian Andes

Topography is a factor that can significantly affect the diversity and the distribution of trees species in tropical forests. Aniba perutilis, a timber species listed as vulnerable to extinction, is widely distributed in Andean forest fragments, especially in those with highly variable topography. Based on field surveys and logistic regression analyses, we studied the population structure and the effect of highly variable topography on the spatial distribution of this tree in three protected forest fragments in the central Andes of Colombia. Individuals of A. perutilis were mainly found on mountain ridges and hills with gentle slopes; no individuals were found in valleys. Using a species distribution model with presence/absence data, we showed that the available habitat for A. perutilis is significantly smaller than the extension of the fragments and much smaller than the extension of the currently protected areas. Our results have important implications for the conservation of A. perutilis and likely for other threatened Andean tree species, which can also have locally restricted distributions due to highly variable local topography.

La topografía es un factor que puede afectar considerablemente la diversidad y la distribución de las especies de árboles tropicales. Aniba perutilis, una especie de árbol maderable vulnerable a la extinción, está ampliamente distribuida en fragmentos de bosques andinos, especialmente en aquellos con topografía altamente variable. A partir de trabajo de campo y análisis de regresión logística, estudiamos la estructura de la población y los efectos de la topografía sobre la distribución espacial de este árbol en tres fragmentos de bosque en la cordillera central de Colombia que actualmente se encuentran protegidos. Los individuos de A. perutilis se encontraron principalmente en los filos de montaña y colinas con gradientes topográficos suaves; no se encontraron individuos en los valles. A partir de un modelo de distribución de especies usando datos de presencia/ausencia, mostramos que el hábitat disponible para A. perutilis es considerablemente más pequeño que la extensión de los fragmentos y mucho más reducido que la extensión actual de las áreas protegidas. Nuestros resultados tienen implicaciones importantes para la conservación de A. perutilis y probablemente otras especies de árboles andinos amenazados, los cuales pueden estar restringidos de forma similar debido a la variabilidad topográfica local.

Vacíos en la literatura sobre filosofía de la educación ambiental:: una revisión de las corrientes de la filosofía / Ambiental gap inn environmental education phiosophy literature:: a review off trends in environmental philosophy

El presente artículo es un producto preliminar del proyecto de investigación "Una propuesta de lineamientos para la formación ambiental en la educación superior colombiana", adelantado con la Universidad Antonio Nariño durante los años 2011 y 2012. Son dos los objetivos que se persiguen: por un lado, demostrar el vacío de la literatura sobre filosofía de la educación ambiental; y por otro lado, mostrar que a pesar de que las reflexiones epistemológicas sobre filosofía ambiental son pobres, la literatura sobre corrientes de la filosofía ambiental es prolífica. De manera que el orden de la exposición recurre, primero, a una revisión de la literatura sobre filosofía de la educación ambiental; segundo, a una revisión de la literatura sobre filosofía ambiental; y tercero, a un análisis de las principales corrientes, a saber, la ecología profunda, la biología de la conservación, el biorregionalismo y el ecofeminismo.

This article is a preliminary product of the research project "A proposal of guidelines for environmental training in Colombian Higher Education" carried out with Universidad Antonio Nariño during the years 2011and 2012. There are two objectives to be achieved: to demonstrate the void of literature on environmental education philosophy and to show that, despite the epistemological reflections on environmental philosophy are poor, the literature on trends in environmental philosophy is prolific. Thus, the order of the presentation is, first, a literature review on environmental education philosophy;, secondly, a literature review on environmental philosophy; and in third place, an analysis of the main trends, namely, deep ecology, conservation biology, bioregionalism and ecofeminism.

Education as a tool for addressing the extinction crisis: Moving students from understanding to action

Human activity is leading to mass species extinctions worldwide. Conservation biology (CB) courses, taught worldwide at universities, typically focus on the proximal causes of extinction without teaching students how to respond to this crisis. The Extinction of Species 360 course has been taught yearly each fall semester to several hundred students at the University of Wisconsin-Madison for over two decades. In 2007 the instructor and five teaching assistants combined principles driving extinctions, based on traditional lectures and discussion sections, with action-oriented education targeting individual consumer habits, to a group of 285 students. Students learn the science underpinning conservation efforts, as evidenced by highly significant learning (<.001) gains in a 22 question survey in every measured category, and also make direct and immediate changes in their lifestyle and consumption habits. This course succeeded in each of its three primary goals: a) informed students about the value of and threats to biodiversity, similar to traditional CB courses, b) emphasized our personal role (as consumers) in perpetuating the extinction crisis and c) facilitated activities to reduce our impact and help alleviate the crisis. The results suggested students learned CB concepts and understood biodiversity’s value, increased their awareness of the connection between personal consumption and extinction, and reduced their collective ecological footprints. Furthermore, students complemented their learning and multiplied the potential for consumption reduction, by participating in action-based activities. Such academic courses can provide a rigorous treatment of the direct and indirect causes of extinction while developing a student’s sense of personal empowerment to help slow the extinction crisis. Rev. Biol. Trop. 58 (4): 1115-1126. Epub 2010 December 01.

La actividad humana está produciendo grandes extinciones de especies en todo el mundo. Los cursos de biología de la conservación (BC), impartidos en universidades de todo el mundo, por lo general se enfocan en las causas de la extinción, sin enseñar a los estudiantes cómo responder a esta crisis. Durante más de dos décadas, la Universidad de Wisconsin-Madison ha ofrecido el curso Extinción de las Especies (#360), que se ha dado cada año, durante otoño a varios cientos de estudiantes cada vez. En 2007 el instructor y cinco asistentes de enseñanza combinaron los principios de manejo de la extinción, con base en presentaciones tradicionales y una sección de discusión, con educación con acción-orientada a los hábitos individuales de consumo, a un grupo de 285 estudiantes. Ellos aprendieron que la ciencia sustenta los esfuerzos de conservación, como lo demuestra el aprendizaje altamente significativo (P<.001) en una encuesta de 22 preguntas en todas las categorías medidas, y en cambios directos e inmediatos en su estilo de vida y hábitos de consumo. Este curso tuvo éxito en cada uno de sus tres objetivos principales: a) los estudiantes fueron informados sobre el valor y las amenazas a la biodiversidad, similar a los tradicionales cursos de BC, b) hizo hincapié en nuestro papel personal (como consumidores) en perpetuar la crisis de la extinción y c) facilito actividades para reducir nuestro impacto y ayudar a disminuir la crisis. Los resultados sugieren que los estudiantes aprendieron conceptos de CB y comprendieron el valor de la biodiversidad, aumentaron su preocupación por la conexión entre el consumo personal y la extinción, y redujeron la huella ecológica colectiva. Además, los estudiantes complementaron su aprendizaje y se multiplicó el potencial de reducción del consumo, mediante la participación en actividades basado en acciones concretos. Estos cursos académicos pueden proporcionar un tratamiento riguroso de las causas directas e indirectas de la extinción, al mismo tiempo que desarrollar en el estudiante el sentido de poder personal para ayudar a disminuir la crisis de la extinción.

Waterbirds and human-related threats to their conservation in Laguna Cuyutlán, Colima, México

Laguna Cuyutlán, the only large wetland in a span of 1 150 km along the Pacific coast of México, has been neglected as to its importance for waterbird conservation. At least 25 waterbird species nest there, with some of their colonies being very relevant, and at least 61 waterbird species use the lagoon during their nonbreeding season. This lagoon has been subject to several structural modifications, including levees and artificial channels which connect it to the sea, while water supply from continental sources has diminished, although its role has not been assessed yet. Salt extraction and artisanal fishery, the main economic activities, do not seem to pose a threat to waterbirds. Among potential threats to this acquatic ecosystem, are the raw sewage discharges that exist near urban areas, and pesticides from the surrounding agricultural lands might reach the lagoon. Seemingly, the most serious threat comes from waterway development in connection with a re-gasification plant to be built, and planned future port expansion, which could potentially increase water levels and alter important habitats for nesting and foraging. We recommend that: the area be declared an Important Bird Area; the development of the re-gasification plant and future port includes a levee to prevent alterations in water level in the remaining sections of the lagoon; supply of exogenous chemicals and waste products be prevented and monitored; alleged benefits from water interchange between the lagoon and the sea through artificial channels should be re-evaluated; and the role of fresh water supplies to the lagoon should be paid attention to. Rev. Biol. Trop. 57 (1-2): 1-12. Epub 2009 June 30.

Laguna Cuyutlán, el único humedal grande a lo largo de 1 150 km del Pacífico mexicano, no ha sido considerado un ecosistema natural importante para la conservación de aves acuáticas. Cuando menos 25 especies de aves acuáticas anidan ahí, y al menos 61 especies de aves acuáticas la usan fuera de la temporada reproductiva. Esta laguna ha sufrido varias modificaciones estructurales, y el aporte de agua dulce ha disminuido, sin que se conozcan sus consecuencias. La extracción de sal y la pesca artesanal, las principales actividades económicas, no parecen ser riesgo para las aves acuáticas. Entre los riesgos potenciales, están las aguas negras cerca de zonas urbanas y los plaguicidas de zonas agrícolas colindantes. Aparentemente, el riesgo más serio deriva del desarrollo marítimo asociado con una planta regasificadora a construirse pronto, y del desarrollo portuario futuro, que podrían incrementar los niveles de agua en la laguna y alterar los hábitats de las aves acuáticas. Recomendamos que: el área se declare como AICA; el desarrollo futuro incluya un dique para prevenir alteraciones en el nivel del agua en el resto de la laguna; el aporte de sustancias agroquímicas y aguas negras se monitoree; se reevalúen los supuestos beneficios del intercambio de agua entre la laguna y el mar por medio de canales artificiales; y se investigue científicamente los aportes de agua dulce a la laguna.

Identifying management units in non-endangered species: the example of the sloth Bradypus variegatus Schinz, 1825

In this study we propose the analysis of genetic diversity of the common three-toed sloth, Bradypus variegatus, in an attempt to understand population structure, identify divergent intraspecific units, and contribute to the knowledge of biodiversity in the neotropical forests. We analyzed a 387 bp segment of the mitochondrial DNA control region in 28 individuals distributed in different localities of both Atlantic and Amazon forests. Our results demonstrated that the genetic diversity of B. variegatus is distributed in six management units, MUs. The observed MUs encompass six phylogenetic lineages and represent respectively north and south regions of Atlantic forest, three regions within the Amazon forest, and a transition region between these two biomes. Considering the fact that these MUs are concordant with phylogroups and endemism areas already described for other vertebrate species, we can say that the study of B. variegatus, a widely distributed and not endangered species, can help to identify areas for conservation biology purposes in neotropical rain forests.

Neste estudo nós realizamos a análise da diversidade genética da preguiça comum, Bradypus variegatus, a fim de compreender os padrões de estrutura populacional, identificar unidades intraespecíficas divergentes e contribuir para o conhecimento da biodiversidade nas florestas da região neotropical. Nós analisamos um segmento de 387 pb da região controle do DNA mitocondrial de 28 indivíduos distribuídos em diferentes localidades da Floresta Amazônica e da Mata Atlântica. Os resultados obtidos demonstram que a diversidade genética da espécie pode ser representada em seis diferentes unidades de manejo (UM). Tais UMs englobam seis linhagens filogenéticas e estão localizadas em diferentes regiões geográficas sendo elas, as porções norte e sul da Mata Atlântica, três regiões dentro da área de Floresta Amazônica e uma área de transição entre os dois domínios de mata. As diferentes unidades intraespecíficas de B. variegatus são concordantes com grupos filogeográficos e áreas de endemismo já observadas para outras espécies de vertebrados. Levando em consideração o fato de que estas UMs concordam com filogrupos e áreas de endemismo previamente descritos para outras espécies de vertebrados, o estudo da preguiça comum, uma espécie amplamente distribuída e considerada não ameaçada de extinção, pode auxiliar na identificação de áreas destinadas à conservação biológica ao longo das florestas úmidas da região neotropical.

Identifying management units in non-endangered species: the example of the sloth Bradypus variegatus Schinz, 1825

In this study we propose the analysis of genetic diversity of the common three-toed sloth, Bradypus variegatus, in an attempt to understand population structure, identify divergent intraspecific units, and contribute to the knowledge of biodiversity in the neotropical forests. We analyzed a 387 bp segment of the mitochondrial DNA control region in 28 individuals distributed in different localities of both Atlantic and Amazon forests. Our results demonstrated that the genetic diversity of B. variegatus is distributed in six management units, MUs. The observed MUs encompass six phylogenetic lineages and represent respectively north and south regions of Atlantic forest, three regions within the Amazon forest, and a transition region between these two biomes. Considering the fact that these MUs are concordant with phylogroups and endemism areas already described for other vertebrate species, we can say that the study of B. variegatus, a widely distributed and not endangered species, can help to identify areas for conservation biology purposes in neotropical rain forests.

Neste estudo nós realizamos a análise da diversidade genética da preguiça comum, Bradypus variegatus, a fim de compreender os padrões de estrutura populacional, identificar unidades intraespecíficas divergentes e contribuir para o conhecimento da biodiversidade nas florestas da região neotropical. Nós analisamos um segmento de 387 pb da região controle do DNA mitocondrial de 28 indivíduos distribuídos em diferentes localidades da Floresta Amazônica e da Mata Atlântica. Os resultados obtidos demonstram que a diversidade genética da espécie pode ser representada em seis diferentes unidades de manejo (UM). Tais UMs englobam seis linhagens filogenéticas e estão localizadas em diferentes regiões geográficas sendo elas, as porções norte e sul da Mata Atlântica, três regiões dentro da área de Floresta Amazônica e uma área de transição entre os dois domínios de mata. As diferentes unidades intraespecíficas de B. variegatus são concordantes com grupos filogeográficos e áreas de endemismo já observadas para outras espécies de vertebrados. Levando em consideração o fato de que estas UMs concordam com filogrupos e áreas de endemismo previamente descritos para outras espécies de vertebrados, o estudo da preguiça comum, uma espécie amplamente distribuída e considerada não ameaçada de extinção, pode auxiliar na identificação de áreas destinadas à conservação biológica ao longo das florestas úmidas da região neotropical.

Diversidade de Bethylidae (Hymenoptera) do parque nacional da Serra do Divisor, Acre, Brasil e seu uso no plano de manejo e conservação da área

Malaise traps were set at 12 sampling sites in November, 1996 in the northern and in March, 1997 in the southern regions of Serra do Divisor National Park. One hundred and two morphospecies were recognized, belonging to 8 genera of Bethylidae. Diversity of these wasps was higher at the northern region of the park. Conservation priority of genera and morphospecies, relative importance of areas and average (conservation) priority for species was employed to propose a conservation model for the park, based on Bethylidae fauna. The conservation of the exclusive species was considered priority. Sampling sites S6, N9, N6 and N5 presented the highest indices of relative importance due to this high species diversity.

Foram utilizadas prioridades de conservação de morfo-espécies e gêneros, importância relativa de sítios e prioridade média para estabelecer um modelo de conservação para o Parque Nacional Serra do Divisor no Estado do Acre, Brasil, baseado na fauna de Bethylidae. Foram instaladas armadilhas Malaise em 12 sítios amostrais nas regiões norte em novembro de 1996 e sul do março de 1997, sendo reconhecidas 102 morfo-espécies de 8 gêneros de Bethylidae, com maior diversidade na região norte do parque. As morfo-espécies exclusivas foram os táxons com maior prioridade de conservação. Os sítios S6, N9, N6 e N5 apresentaram os índices mais altos de importância relativa para conservação por terem sido mais diversos.