Cultural, morphological and molecular diversity of Ustilaginoidea virens (Cooke) Tak. isolates causing false smut of rice in different agroclimatic regions of Karnataka

The ascomycete fungal pathogen Ustilaginoidea virens (Cooke) Takahshi cause false smut in rice and considerable yield loss. In this study, we collected isolates of U. virens from the rice growing ecosystems of Karnataka and characterized for cultural, morphological and molecular characters. The isolates of the fungus on Potato Sucrose Agar media exhibited distinct colonies with colony growth ranging from 21.50 mm (Uv-20) to 70.00 mm (Uv-15). The colony colour appeared as whitish to yellowish with varied growth pattern from flat, raised flat to fluffy and raised fluffy colonies with sectoring in Uv-1, Uv-3, Uv-6 and Uv-9 isolates. The isolates of U. virens also showed variation in the morphology of spores, where the conidia were globose, irregularly round to elliptical and warty on the surface with spore radius ranging from 2.91 to 5.36 ?m. The scanning electron microscopy revealed hyaline globose to irregularly rounded ornamented chlamydospores with prominent spines. Besides cultural and morphological characters, molecular identification of false smut isolates was confirmed through ITS sequencing which showed 91 to 99 per cent identity with U. virens in NCBI-BLAST analysis. Dendrogram constructed using ITS sequence data broadly separated the isolates into two major clusters with divergence among clusters. This ITS (internal transcribed spacer) sequencing of isolates should help better understanding of the phylogenetic relationships among these isolates.

Screening for seedling stage salinity tolerance and comparative transcriptome analysis in Rice (Oryza sativa L.)

Soil salinity is one of the major abiotic stresses which affect crop productivity including rice, Oryza sativa L. Developing salt tolerant varieties gained considerable attention accordingly. Here, we studied salinity tolerance in rice crop. We screened ten rice genotypes for saline tolerance at different concentrations of 0 dSm-1, 2 dSm-1, 4 dSm-1, 6 dSm-1, 8 dSm-1,10 dSm-1, 12 dSm-1 and 14 dSm-1, respectively. Among the ten genotypes studied, CARIDhan-7 tolerated salt stress up to 6dSm-1 of irrigated water. Comparative transcriptome analysis was done with the genotypes by treating with saline water at 0dSm-1 and 6 dSm-1. A total of 1013 genes were differentially expressed under simulated stress conditions. Out of which, 551 genes were upregulated and 462 genes were downregulated. Based on the metabolic pathway analysis, the MAPK signaling pathway, along with the other 9 pathways were found to be enriched in the stressed sample. Nine ion transporter genes, 1potassium channel, 1 protein phosphatase gene, IAA homologs OsIAA9, two ROS scavenging-related genes, and 4 stress regulated genes identified were found to be significantly up-regulated along with some functional proteins previously reported under salt stress. An AP2-like ethylene-responsive transcription factor PLETHORA 2 was found to be downregulated. The results suggested that the CARIDhan-7 genotype undergoes various saline tolerant mechanisms and pathways in response to the stress imposed when compared to non-stressed seedlings.

Efficiency of honeycomb selection design in early segregating generation in ADT45 × Nona Bokra cross under salt stress

Salt stress is a major abiotic stress that limits rice productivity worldwide including India. As modern rice varieties are salt sensitive, infusing salt tolerance through breeding is a viable farmer-friendly approach. Breeding salt tolerant rice varieties has been slow due to complexity of the trait and high Genotype x Environment interaction in the salt affected field. Selection practiced in such a situation using conventional selection method, in the presence of competition, would be misleading. On the otherhand, selection is effective in the absence of competition in honeycomb selection and counteracts the disturbing effects of competition on effectiveness of selection. The present study was conducted to test the efficiency of honeycomb selection design in early generation of a rice cross to study genetics of yield and practice selection. All the characters studied in both the design showed non normal distribution except for panicle length in CSD. All the characters studied in both the design had lower coefficient of variation, high mean and high standard deviation in the HSD compared to CSD. Large number of genes with duplicate epistasis governs days to flowering whereas panicle length and single plant yield are governed by few number of genes with complimentary epistasis. Twenty nine F2 plants each in CSD and HSD were selected based on mean and plant index (SPY), respectively. Plants selected in HSD recorded higher percentage of increase over base population compared to CSD and found HSD to be superior to CSD because of enhanced phenotypic expression in the former by eliminating confounding effects of negative correlation between yielding and competitive ability.

Protective effect of breviscapine on acute lung injury in rats with infectious shock

Acute lung injury (ALI), during the progression of infectious shock, leads to systemic inflammatory response syndromewith increased pulmonary capillary membrane permeability due to pulmonary inflammation and uncontrolled inflammatoryresponses. It may cause fatality in patients. Here, we evaluated the protective effect of breviscapine on ALI in rats withinfectious shock. Sprague-Dawley (SD) rats were assigned into Sham, model [lipopolysaccharide (LPS) group], andbreviscapine treatment groups (LPS + breviscapine group) and weighed. The lung coefficient, and the wet-to-dry weightratio (W/D) and moisture content of lung tissues were calculated. The pathological changes of the lung tissues were detectedusing hematoxylin-eosin (HE) staining, and the protein expressions of interleukin-1 beta (IL-1?), IL-6, and tumor necrosisfactor-alpha (TNF-?) were determined by enzyme-linked immunosorbent assay. Western blotting was conducted to measurethe protein expressions of toll-like receptor-9 (TLR-9) and nuclear factor-kappa B (NF-?B) (p65). Compared with LPSgroup, breviscapine significantly lowered the lung coefficient and the W/D and moisture content of lung tissues, relieved thepathological changes of lung tissues, reduced the protein expression levels of IL-1?, IL-6, and TNF-?, weakened theactivation of NF-?B (p65) in lung tissues, and repressed the protein expressions of TLR-9 and NF-?B (p65).

Screening and formulation of novel carriers for Xanthomonas bacteriophage to control bacterial leaf blight disease

Aims@#This study was aimed to evaluate the potential of several carriers to formulate the phages and retain their activity under various pH and temperature conditions.@*Methodology and results@#The skim milk, rice flour, corn flour and CalnuXan (calcium and magnesium) as carriers to formulate the isolated phage to maintain its activity under extreme pH and temperature conditions. Two phages formulated with carriers retained their viability at pH 5, pH 7 and pH 9 compared to that of the unformulated phages. Besides, the formulated phages also retained a high titre compared to the unformulated phages when they were exposed to 37 °C and 45 °C. Based on the in vitro study of the formulation, it was applied in the glass house. The plant height, leaf chlorophyll and disease scoring were recorded and analyzed. In the glass house, the rice plant treated with formulated phages showed higher plant height and chlorophyll content than those treated with unformulated or untreated phages. Nonetheless, both formulated and unformulated protected the rice plant, which showed lower disease severity than the untreated group.@*Conclusion, significance and impact of study@#Phage therapy has been used for treating plant diseases caused by pathogenic bacteria. Despite their effectiveness in killing the pathogen in vitro, the results were not reproducible in the field. Bacteriophages (phages) are sensitive to environmental factors and infection efficiency was dropped when exposed to harmful environments. However, this study successfully formulated two novels Xanthomonas phages, as biocontrol agents against bacterial leaf blight (BLB) disease in rice.

Effects of ultra high dilution of paraquat 30 ch on growth, chlorophyll content and yield of rice crop

The application of synthetic fertilizers reduces the natural fertility of the soil and contaminates groundwater. Some photosynthesis inhibitors at ultra-high dilution (UHD) increase photosynthesis, growth, and yield of crops. A weedicide Paraquat at UHD enhanced the growth and yield of potatoes in fields. The objective is to see whether the UHD of Paraquat is also effective on rice. This weedicide was serially diluted with distilled water and manually succussed in 30 steps following the preparation of homeopathic dilutions called potencies. In this way, the 30thpotency of Paraquat called Paraquat 30 cH was prepared and preserved in 90 % ethanol. Paraquat 30 cH was diluted with water 1:1000 (v/v) and sprayed on rice plants in a field measuring 0.3125 acres. The control plot of the same area was situated 300 meters away from the test plot. Three treatments were given at an interval of 7 days. The treated plot showed increased growth, chlorophyll content, and rice yield significantlycompared to control. The UHD of the weedicide produced precisely the opposite effect of the crude material on plants. The increased growth and yield of rice by Paraquat 30 cH may be due to the enhancement of photosynthesis of treated plants. The UHD of Paraquat increased the yield of rice by 19.35% over the control.

How silicon fertilizer improves nitrogen and phosphorus nutrient availability in paddy soil? / 浙江大学学报（英文版）（B辑：生物医学和生物技术）

In order to reveal the mechanism of silicon (Si) fertilizer in improving nitrogen (N) and phosphorus (P) nutrient availability in paddy soil, we designed a series of soil culture experiments by combining application of varying Si fertilizer concentrations with fixed N and P fertilizer concentrations. Following the recommendations of fertilizer manufacturers and local farmers, we applied Si in concentrations of 0, 5.2, 10.4, 15.6, and 20.8 μg/kg. At each concentration of added Si, the availability of soil N and P nutrients, soil microbial activity, numbers of ammonia-oxidizing bacteria and P-decomposing bacteria which means that the organic P is decomposed into inorganic nutrients which can be absorbed and utilized by plants, and urease and phosphatase activity first increased, and then decreased, as Si was added to the soil. These indicators reached their highest levels with a Si application rate of 15.6 μg/kg, showing values respectively 19.78%, 105.09%, 8.34%, 73.12%, 130.36%, 28.12%, and 20.15% higher than those of the controls. Appropriate Si application (10.4 to 15.6 µg/kg) could significantly increase the richness of the soil microbial community involved in cycling of N and P nutrients in the soil. When the Si application rate was 15.6 μg/kg, parameters for characterizing microbial abundance such as sequence numbers, operational taxonomic unit (OTU) number, and correlation indices of microbial community richness such as Chao1 index, the adaptive coherence estimator (ACE) index, Shannon index, and Simpson index all reached maximum values, with amounts increased by 14.46%, 10.01%, 23.80%, 30.54%, 0.18%, and 2.64%, respectively, compared with the control group. There is also a good correlation between N and P mineralization and addition of Si fertilizer. The correlation coefficients between the ratio of available P/total P (AP/TP) and the number of ammonia-oxidizing bacteria, AP/TP and acid phosphatase activity (AcPA), AP/TP and the Shannon index, the ratio of available N/total amount of N (AN/TN) and the number of ammoniated bacteria, and AN/TN and AcPA were 0.9290, 0.9508, 0.9202, 0.9140, and 0.9366, respectively. In summary, these results revealed that enhancement of soil microbial community structure diversity and soil microbial activity by appropriate application of Si is the key ecological mechanism by which application of Si fertilizer improves N and P nutrient availability.

Single cell oil production by a novel yeast Trichosporon mycotoxinivorans for complete and ecofriendly valorization of paddy straw

Background: Oleaginous yeasts can be grown on different carbon sources, including lignocellulosic hydrolysate containing a mixture of glucose and xylose. However, not all yeast strains can utilize both the sugars for lipogenesis. Therefore, in this study, efforts were made to isolate dual sugar-utilizing oleaginous yeasts from different sources. Results: A total of eleven isolates were obtained, which were screened for their ability to utilize various carbohydrates for lipogenesis. One promising yeast isolate Trichosporon mycotoxinivorans S2 was selected based on its capability to use a mixture of glucose and xylose and produce 44.86 ± 4.03% lipids, as well as its tolerance to fermentation inhibitors. In order to identify an inexpensive source of sugars, nondetoxified paddy straw hydrolysate (saccharified with cellulase), supplemented with 0.05% yeast extract, 0.18% peptone, and 0.04% MgSO4 was used for growth of the yeast, resulting in a yield of 5.17 g L−1 lipids with conversion productivity of 0.06 g L−1 h−1 . Optimization of the levels of yeast extract, peptone, and MgSO4 for maximizing lipid production using Box­Behnken design led to an increase in lipid yield by 41.59%. FAME analysis of single cell oil revealed oleic acid (30.84%), palmitic acid (18.28%), and stearic acid (17.64%) as the major fatty acids. Conclusion: The fatty acid profile illustrates the potential of T. mycotoxinivorans S2 to produce single cell oil as a feedstock for biodiesel. Therefore, the present study also indicated the potential of selected yeast to develop a zero-waste process for the complete valorization of paddy straw hydrolysate without detoxification

Bacterial pretreatment of paddy straw for enhancing biogas production

Aim: Increasing the digestibility of paddy straw and biogas production by pretreating it with bacterial culture, Delftia sp. PP4_S3. Methodology: The chopped (3-5 cm) and soaked paddy straw in different sets (each with 250 g PS) were pretreated with bacterial culture i.e., Delftia sp. PP4_S3 suspension for different durations and was further utilized for biogas production. Results: Biogas yield was highest (180 l kg-1 PS) in paddy straw treated with Delftia sp. PP4_S3 for 3 days showing an increase of 66.1% from untreated paddy straw. Chemical analysis approximately showed that maximum reduction of lignin (45.7%) and silica (17.7%) occurred in 5 days of pretreatment. Interpretation: Treatment of paddy straw with Delftia sp. PP4_S3 enhance the digestibility of paddy straw by lowering the lignin and silica content. These observations showed that Delftia sp. PP4_S3 is a good lignocellulosic degrader and can be efficiently used for enhancing biogas production

Influence of summer crop residues on 15N present in organic matter fractions under two lowland soils / Influência de resíduos de culturas de verão sobre o 15 N em frações da matéria orgânica de dois solos de terras baixas

ABSTRACT: The state of Rio Grande do Sul has about 20% of the total area as lowland soils, suitable for flooded rice (Oryza sativa). In order to mitigate damage caused by rice monoculture, new crops such as sorghum (Sorghum bicolor) and soybean (Glycine max) have been cultivated in these areas. With different qualities of crop residues, it is expected a change in soil organic matter (SOM) dynamics and consequently, nitrogen (N) availability. The objective of this study was to evaluate the influence of rice, soybean and sorghum crop residues on the N present in physical fractions of SOM of two lowland soils, using labeled 15N technique, under incubation for 180 days in aerobic condition and more 180 days in anaerobic condition. At 30, 180 and 360 days of incubation the remaining N of the plant residues and N destination from the residues in both soils were quantified in the physical fractions of SOM >250 μm, 250-53 μm and <53 μm. The soil with higher amount of clay+silt received a larger quantity of 15N from residues, while flooding of the soil after 180 days caused a loss of N added to the soil by the soybean and sorghum residues. In general, larger amounts of 15N were reported in the fraction <53 μm, associated with clay minerals, throughout the incubation period. These N losses should be considered in N fertilization for the following crops in rotation with flooded rice.

RESUMO: O Rio Grande do Sul possui cerca de 20% da área total de solos de terras baixas, propícias para o cultivo do arroz (Oryza sativa) irrigado por inundação. Buscando mitigar danos ocasionados com o monocultivo de arroz, novas culturas, como o sorgo (Sorghum bicolor) e a soja (Glycine max), têm sido cultivadas nestas áreas. Com diferentes qualidades de resíduos culturais, espera-se uma alteração na dinâmica da matéria orgânica do solo (MOS) e, consequentemente, do nitrogênio (N). O objetivo deste estudo foi avaliar a influência de resíduos culturais de arroz, soja e sorgo na quantidade de N em frações físicas da MOS de dois solos de terras baixas, utilizando a técnica de marcação isotópica de 15N das culturas e uma incubação por um ciclo de 180 dias em condição aeróbica e mais 180 dias em condição anaeróbica. Aos 30, 180 e 360 dias de incubação foi quantificado o N remanescente dos resíduos vegetais e destino do N proveniente dos resíduos nos dois solos em frações físicas da MOS >250 μm, 250-53 μm e <53 μm. O solo com maior quantidade de argila+silte recebeu maior quantidade de 15N dos resíduos, enquanto que o alagamento do solo após 180 dias de incubação ocasionou uma perda do N adicionado ao solo pelos resíduos de soja e sorgo. De maneira geral, foram encontradas maiores quantidades de 15N na fração <53 μm, associado aos argilominerais. As perdas de N devem ser consideradas na adubação nitrogenada para as culturas sequentes nos sistemas de rotação de culturas com arroz irrigado.

Antifungal properties of Mimusops elengiseeds against paddy seed-borne fungi and selected pathogenic fungi 152-158

@#Aims:The ever-revolving fungi strains and environmental and health concerns due to current practice of synthetic pesticide in agricultural fields have encourages more ventures into bio-pesticides research. Mimusops elengi, a widely available endogenous plant intropical countries and most parts of this plant have been proven to possess medicinal and antimicrobial potential. In this study, M.elengiseeds crude extracts are tested for their antifungal activities on paddy seed-borne and pathogenic fungi.Methodology and results:The dried and grinded M.elengiseeds are macerated separately using water, methanol, ethyl acetate, dichloromethane and petroleum ether as extraction medium. Crude extract of each solvent wasused on paddy seed surface treatment to determine their antifungal inhibition potential on seed-borne fungi and paddy grain germination. Synthetic fungicide mancozeb and thiram are also tested as comparisons to the performance of plant extracts. Water andmethanol extracts exerted the best fungal inhibiting and grain germination results from the five crude extracts tested and qualitative phytochemical screening reveals both extracts contained the most number of phytoconstituents including saponin, flavonoids, alkaloids, tannins and phenolic. Water extract, methanol extracts and synthetic fungicides are then subjected to in-vitro bioassay to observe their effect on mycelial growth of several fungi strains pathogenic to paddy namely, Fusarium fujikuroi,Curvularia aeria,C.lunata andC.eragrostidis.Water and methanol extracts showed a very similar trend of inhibition on all four fungi strains tested with best percentage of inhibition on mycelia growth of C.eragrostidisfollowed by C. aeria, C. lunataand least effective on F.fujikuroi. Further separation of crude extract need to be done to isolate the specific acting compounds contributing to fungal growth inhibition.Conclusion, significance and impact of study:Both water and methanol extracts of the seeds contain promising antifungal properties on seed borne fungi which is as good as the synthetic fungicides compared in this study. A broad range of active phytochemical properties it possesses may be the contributing factor for the fungal growth inhibition. This preliminary screening could narrow down the potential of this seed extracts as natural antifungal agents and the acting active compounds.

Analysis of 2,2-DCP degrading bacteria isolated from a paddy field at a rural area in Malang, Indonesia

Aims@#The use of herbicide effectively controls weeds in agricultural practice. However, its release to the surrounding surface water bodies may lead to environmental issues. The aim of this study was to isolate the bacteria that were able to remove 2,2-dichloropropionic acid (2,2-DCP) from a paddy field located in Malang. @*Methodology and results@#The 2,2-DCP degrading bacteria were isolated and their ability to grow on higher 2,2-DCP concentrations (50 and 80 mM) was tested. Bacterial degradation of 2,2-DCP was examined through measurement of released chloride ions. The potential isolates were identified according to their 16S rDNA sequences. Two potential isolates, BB9.2 and BC14.3 were observed for their growth on 20, 50, and 80 mM 2,2-DCP. Isolate BC14.3 had the shortest cell doubling time of approximately 4.1 h with 100% 2,2-DCP (20 mM) utilization, whereas BB9.2 was only able to degrade 80% of 2,2-DCP at the same concentration. The 16S rDNA gene sequences suggested that BB9.2 and BC14.3 belong to Acinetobacter calcoaceticus and Pseudomonas plecoglossicida, respectively. @*Conclusion, significance and impact of study@#Bacterial strains with 2,2-DCP degrading potentials were successfully isolated from long-term exposed agricultural soil. They demonstrated notable utilization of the organic halide. This is the first time that strains of A. calcoaceticus and P. plecoglossicida were reported to utilize 2,2-DCP.

Endozoochorous dispersal of seeds of weedy rice (Oryza sativa L.) and barnyardgrass (Echinochloa crus-galli L.) by cattle / Dispersão endozoocórica de sementes de arroz daninho (Oryza sativa L.) e capim-arroz (Echinochloa crus-galli L.) por bovinos

ABSTRACT: The objective of this study was to evaluate endozoochory dispersal, recuperation, and germination of weedy rice (Oryza sativa L.) and barnyardgrass (Echinochloa crus-galli L.) seeds passed through the digestive system of cattle. The experiment was divided into two phases: first, the daily seed recuperation rate was determined after passing through the digestive system of six steers. Each animal was dosed individually with 1000 weedy rice seeds and 13,818 barnyardgrass seeds, and these seeds were subsequently collected from feces. In the second phase, seed germination and emergence rate after passing or not passing through the digestive system of cattle were determined in two types of substrates (fecal plaque and soil) in a 2×2 factorial design. Seed recuperation in feces showed sigmoid behavior with maximum recovery on the second day after dosage. The recuperation of the species in the feces was 50.9% and 23.4% for weedy rice and barnyardgrass, respectively, which shows that both have potential endozoochory dispersal. However, seed germination of these species reduced after they passed through the digestive system, and they presented inferior emergence in the fecal plaque compared to the soil. The quarantine period for animals that ingest weedy rice and barnyardgrass seeds should be at least 6 and 7 days, respectively.

RESUMO: O objetivo deste trabalho foi avaliar a dispersão endozoocórica, recuperação e germinação de sementes de arroz daninho (Oryza sativa L.) e capim-arroz (Echinochloa crus-galli L.) passadas pelo sistema digestivo de bovinos. O experimento foi dividido em duas fases: primeiramente determinou-se a taxa de recuperação diária das sementes após passagem pelo sistema digestivo de seis bovinos. Foram dosadas individualmente 1000 sementes de arroz daninho e 13818 sementes de capim-arroz para cada animal e posteriormente coletadas nas fezes. Na segunda fase foi determinada a taxa de germinação e emergência de sementes com e sem passagem pelo sistema digestivo de bovinos em dois tipos de substratos (placa fecal ou solo) em delineamento fatorial 2x2. A recuperação de sementes nas fezes apresentou comportamento sigmoide com máxima recuperação no 2° dia após dosagem. A recuperação nas fezes foi de 50,9% e 23,4%, para arroz daninho e capim-arroz, o que demonstra que ambas apresentam potencial de dispersão endozoocórica. Porém, a germinação de sementes destas espécies reduziu ao passar pelo sistema digestivo, e na placa fecal apresentou emergência inferior em comparação ao solo. O período de quarentena para animais que ingerirem sementes de arroz daninho e capim-arroz deve ser de no mínimo 6 e 7 dias, respectivamente.

Effect of salinity and use of stress indices of morphological and physiological traits at the seedling stage in rice.

Rice (Oryza sativa L.) is the most important cereal crop and a major staple food for majority of the human populations worldwide. Rice crop is sensitive to salinity. In spite of large number of studies on salinity tolerance of rice, our knowledge on the overall effect of salinity on rice seedling growth is limited. Improvement in salt tolerance of crop plants remains indescribable, largely due to the fact that salinity is a complex trait which affects almost every aspect of the physiology, biochemistry and genomics of plants. The present investigation was conducted to establish the relationship between various morphological, physiological traits and stress indices. A set of 131 rice accessions was evaluated in two levels namely, non-stress (EC ~ 1.2 dS/m) and saline stress (EC ~ 10 dS/m) in hydroponics at seedling stage. Root length and shoot lengths were reduced by 52 and 50%, respectively in saline stress compared to non-stress conditions. There was a significant correlation between various morphological and physiological parameters in non-saline in addition to saline stress as well as non-stress. The effect of the increased Na+ concentration in the medium is detrimental to root length and shoot length as observed by reduction in root length and a concomitant reduction in shoot length. Increased concentration of Na+ led to augmented Na+/K+ ratio with increased stress in the medium and decreased expression of traits. A significant positive correlation (r=0.60) was noticed between stress tolerance index (STI) of root and shoot length. The stress susceptibility index (SSI) for root length was expressed significant positive correlation with SSI for shoot length (r=0.43). SSI for K+ content was registered significant negative correlation with STI for Na+ content (r=-0.43). The three accessions namely, IC 545004, IC 545486 and IC 545215 were found to be the best performers adjudged on the morphological and physiological criteria in saline stress situation. These three rice accessions could be used as a donor parent or for genotypic studies in future breeding programs.

Cloning and characterization of a water deficit stress responsive transcription factor gene from Oryza sativa L.

Understanding the biochemical and molecular basis of drought mechanism in rice is important as drought is one of the major causes affecting rice crop adversely. A 1017 bp gene sequence encoding AP2/ERF family TF was isolated from Oryza sativa sp. Indica cv N22 encoding a protein of 338 amino acid residues, with a molecular weight of 36.58 kDa, and no intron in the ORF. The gene was named as AP2/ERF-N22(2) different from the drought responsive gene AP2/ERF-N22 that we reported earlier. AP2/ERF-N22(2) has entirely different characteristics from that of AP2/ERF-N22. It has a single AP2 domain of 55 amino acid residues and a cluster of acidic amino acid residues at the C-terminal region, which could function as a trans-activation domain. Presence of NLS indicates that it is a nuclear localized transcription factor encoding gene. It falls in group VI L, sharing characteristic similarities. Arabidopsis members of group VI L have been shown to be involved in response to cytokinin under drought stress.

The effectiveness of methanotrophic bacteria and Ochrobactrum anthropi to reduce CH4 and N2O emissions and to promote paddy growth in lowland paddy fields

Aims: Paddy field is one of the sources of greenhouse gasses such as methane (CH4) and nitrous oxide (N2O), which causes global warming and other negative effects in agricultural sector. An alternative to optimize paddy productivity and reduce emissions of CH4 and N2O is by using methanotrophic bacteria and Ochrobactrum anthropi BL2. Methodology and results: This study consisted of two parts, i.e. positive control and experimental treatments. Positive control consisted of 250 kg/ha NPK inorganic fertilizer NPK (15:15:15) (100% of the recommended normal dose) without any methanotrophic bacteria. Meanwhile the experimental treatment consisted of 50 kg/ha inorganic fertilizers NPK (20% of the recommended normal dose) with methanotrophic bacteria (Methylocystis rosea BGM 1, M. parvus BGM 3, Methylococcus capculatus BGM 9, Methylobacter sp. SKM 14) and N2O reducing bacteria (Ochrobactrum anthropi BL2). Using weight indicator of 1000 grams, all the bacteria are capable of increasing paddy productivity by 42.07%, compared to conventional method which can only increase the productivity by 2.51% (Cepy and Wangiyana, 2011). The increasing productivity and growth of paddy plants were due to the nitrogen fixation activity of M. rosea BGM 1, M. capculatus BGM 9, and Methylobacter sp. SKM 14. In the experimental treatment using bacteria, the emission of CH4 and N2O was reduced with the highest CH4 and N2O sinks of 24018.8 mol CH4/day/ha and 68.48 mol N2O/day/ha, respectively. However, the positive control treatment with 100% of the recommended fertilizer dose showed the highest CH4 and N2O emissions which were up to 74346.45 mol CH4/day/ha and 26.21 mol N2O/day/ha, respectively. Conclusion, significance and impact study: All the methanotropic bacteria and O. anthropi BL2 are significantly increase paddy production, compared to positive control treatment. The addition of bacteria in paddy fields results in CH4 and N2O sinks.

Assessment of Knowledge about Schistosomiasis among Paddy Rice Farmers in Doho and Kibimba, Eastern Uganda.

Aim: To assess knowledge levels on schistosomiasis in farmers and laborers working in paddy rice fields in eastern Uganda. Study Design: A cross-sectional survey among farmers practicing paddy rice farming in Doho and Kibimba. Place and Duration of Study: The study was carried out in April 2014 in Doho and Kibimba rice schemes, eastern Uganda. Methodology: Unequal number of respondents was interviewed and these were selected purposively. Ninety samples (90) were used, 50 from Doho and 40 from Kibimba. A chisquared test was used to test schistosomiasis knowledge differences among respondents between schemes. Results: A chi squared test indicated that there were significant differences in the number of people who had suffered from schistosomiasis at Doho and Kibimba rice schemes (P<0.001). For example Four percent (4%) of respondents in Doho indicated to have suffered from schistosomiasis at one time while 35% interviewed at Kibimba scheme had suffered from this disease. Although there were variations in the proportions of respondents on the rest of the knowledge items between the two sites, these variations were not statistically significant (P>0.05). About 63% of respondents in Kibimba scheme declared to have received schistosomiasis education from the Ministry of health officers. On the contrary, 80% of respondents in Doho scheme indicated that they have not received any schistosomiasis training/education of any kind. Conclusion: Schistosomiasis is prevalent amongst paddy rice farmers in Doho and Kibimba schemes. Although the farmers at Kibimba were more sensitized about this disease, this did not have a significant effect on the level of knowledge about the farmers in the two schemes. We recommend that a much more intensive study supported by laboratory test be done to comprehensively bring out the magnitude of the disease and its impacts in order to inform policy and management decisions by government and respective public and private stakeholders.

Rapid Determination of Nitrogen Isotope Labeled Nitrate Using Mid-Infrared Attenuated Total Reflectance Spectroscopy / 分析化学

The nitrate-N content in KNO3 solution and soil was rapidly predicted using techniques of mid-infrared spectroscopy, in which 15 NO-3 and 14 NO-3 were distinguished and predicted. The results showed that the characteristic band of nitrate in solution and soil was 1200-1500 cm-1 , and compared with 14 NO-3 , the red shift of characteristic band of 15 NO-3 was about 35 cm-1 . In the characteristic band of nitrate, absorption band increased with the nitrate nitrogen concentration with less interference absorption. The linear regression was made between the first principal component of characteristic band and nitrate-N content, and correlation coefficient was more than 0 . 9840 , indicating that the technique of mid-infrared attenuated total reflectance spectroscopy could be applied for rapid monitoring of nitrate in solution and soil. Meanwhile, based on the red shift characteristic of 15 NO-3 absorption band, the method of partial least squares were involved to predict the nitrate-N of different N-isotope labeled in solution and soil, resulting that all the prediction models reached excellent levels. For 14 NO3-N and 15 NO3-N in solution, the correlation coefficients ( R2 ) were 0. 9980 and 0. 9982 respectively, and ration performance to standard deviations ( RPD ) were 6. 44 and 4. 76, respectively. While for 14 NO3-N and 15 NO3-N in soil, the correlation coefficients ( R2 ) were 0. 9794 and 0. 9679, and RPD were 5. 75 and 4. 78, respectively. Therefore, the technique of mid-infrared attenuated total reflectance spectroscopy can be applied for rapid monitoring different N-isotope labeled nitrate in solution and soil, to provide a new in situ and fast time method to study nitrification process in soil.

Selenium, Zinc and Chromium Level Among Paddy Farmers Exposed to Pesticide in MADA, Perlis and Fisherman Community in Mersing, Johor / Jurnal Sains Kesihatan Malaysia

Pesticide exposure can lead to low trace elements levels in human body. Trace element plays important role in body metabolism. The aim of this study was to study the levels of selenium, zinc and chromium among paddy farmers who expose to pesticide in Wilayah I, MADA, Perlis. This cross sectional study involved 70 males paddy farmers and 57subjects living in fisherman village as control group who were aged between 21 to 80 years old. Subjects were interviewed to obtain information on their demographic data by using validated questionnaire. Subjects also were examined for their blood pressure and glucose level. Selenium, zinc and chromium levels were analyzed by using acid digestion method and Inductively Coupled Plasma Mass Spectrometry (ICP-MS). Results showed that selenium levels in hairs (5.11 ± 17.05 μg/L) and nails (4.92 ± 2.17 μg/L) were significantly (p 0.05) between all trace element levels and duration of pesticide exposures. In conclusion, levels of trace elements were lower in nails and hairs of paddy farmers than fisherman community group

The use of rice straw broth as an appropriate medium to isolate purple nonsulfur bacteria from paddy fields

The aims were to explore an appropriate isolating medium for obtaining purple nonsulfur bacteria (PNSB) for use as biofertilizers in saline paddy fields and to obtain pure cultures. We therefore chose a defined isolating medium containing 0.25 percent NaCl, (Glutamate-Acetate broth, GA) and a rice straw broth to compare them for numbers of PNSB obtained, time to obtain pure cultures, diversity and costs. A total of 30 water and 30 sediment samples were collected from saline paddy fields in southern Thailand and used to isolate PNSB in both the isolating media. Based on 60 samples and a period of 13 days incubation under anaerobic light conditions, a greater number of samples produced PNSB growth in GA broth after only day 3; however, after that the rice straw broth provided about a 2 fold increase in the number of samples that produced PNSB growth. Colonies isolated from GA broth required a significantly higher number of repeated streaking to obtain a pure culture (average 3.5) than those from rice straw broth (average 2.7) and the latter medium also produced significantly (P < 0.05) more isolates per sample. Sixty samples of water and sediment, from rice paddies with salinity (average, 3.43 +/- 0.67 mS/cm) and slight acidity (average, pH 5.84 +/- 0.42) provided 62 PNSB isolates by GA broth and 210 isolates by rice straw broth, and rice straw broth also produced a greater prevalence of PNSB. Estimates of the costs based on current prices of media, Gas Pak and electricity to obtain PNSB with the use of GA broth was roughly 6 times higher than for the rice straw broth.