Mycobacterium tuberculosis recombinant protein Rv2626c expressed in Streptomyces lividans. Physico-chemical and Immunological characterization as potential vaccine antigen

Mycobacterium tuberculosis (Mtb) is a leading cause of death globally. Latent tuberculosis infection threatens 1.7 billion people. Mtb latency is mediated by a group of proteins, mainly coded by the Dormancy Safety Regulator (DosR). The protein Rv2626c is the strongest regulated member of this operon. Previous results, including ours, indicate a strong potential of Rv2626c as antigen in a new multiple tuberculosis vaccine. Objectives of this study were to purify the rRv2626c protein and characterize it physico-chemically and immunologically. The purified protein migrates as a sole band after a non-reductive PAGE-silver staining. Under reductive conditions, the dimer isoform appearing at 30.9 kDa prevails over the monomer 15.6 kDa. Mass spectrometry corroborates electrophoresis results regarding dimer molecular weight, of approximately 32 kDa. Six of its digested peptides matched those of HRP-1 protein (Rv2626c) of Mtb whereas 92.1 percent of its amino acid sequence contains three mutations and the addition of an amino acid. With respect to native Mtb protein, 12 of the 13 main epitopes are conserved. Antigenicity was corroborated in volunteers, the antibody responses were significantly higher in a number of infected tuberculosis patients in comparison to healthy Mantoux negative donors as well as in mice immunized with reference Rv2626c, while the immune identification pattern was as expected. The purified protein was able to elicit strong immune response in mice and the resulting antibodies recognized the reference Rv2626c protein. Lastly, the productive specific yield of the Streptomyces lividans strain is sustainable. Taking these results altogether, corroborates our rRv2626c as a promising candidate as antigen for new tuberculosis vaccine formulations(AU)

Mycobacterium tuberculosis (Mtb) es una de las principales causas de muerte globalmente, la tuberculosis latente amenaza a 1,7 mil millones de personas. En combinación con el VIH-SIDA y otras enfermedades, la tuberculosis puede ser reactivada. La latencia de Mtb está mediada por un grupo de proteínas, principalmente codificadas por el Regulador de Seguridad de Latencia (DosR). La proteína Rv2626c es el miembro más fuertemente regulado de este operón. Los resultados previos, incluidos los nuestros, indican una gran potencialidad de Rv2626c como antígeno en una nueva vacuna múltiple contra la tuberculosis. Los objetivos de este estudio fueron purificar la proteína Rv2626c y caracterizarla fisicoquímica e inmunológicamente. La proteína purificada migra como una banda única después de PAGE con tinción de plata en condiciones no reductoras. En condiciones reductoras, el dímero, de 30,9 kDa, es la isoforma prevaleciente sobre el monómero, de 15,6 kDa. La espectrometría de masas corrobora el peso molecular del dímero, de aproximadamente 32 kDa. Seis de sus péptidos digeridos coincidieron con los de la proteína Rv2626c de Mtb, mientras que se confirmó coincidencia del 92,1 por ciento de su secuencia de aminoácidos, detectándose tres mutaciones y la adición de un aminoácido. Con respecto a la proteína Mtb nativa, se conservan 12 de los 13 epítopes principales. La antigenicidad se corroboró en voluntarios, las respuestas de anticuerpos fueron significativamente mayores en un número de pacientes infectados con tuberculosis en comparación con los donantes negativos de Mantoux sanos, así como en ratones inmunizados con la referencia Rv2626c, mientras que el patrón de identificación inmune fue el esperado. La proteína purificada fue capaz de provocar una fuerte respuesta inmune en ratones y los anticuerpos resultantes reconocieron la proteína de referencia Rv2626c. Por último, el rendimiento productivo específico de la cepa de Streptomyces lividans es sostenible. Tomando estos resultados en conjunto, corrobora nuestra rRv2626c como un candidato prometedor como antígeno para nuevas formulaciones de vacunas contra la tuberculosis(AU)

Influencia del medio de cultivo sobre la cinética de crecimiento y expresión de la proteína recombinante Rv2626c de Mycobacterium tuberculosis H37Rv expresada en Streptomyces lividans TK24 / Influence of the culture medium on the kinetics of growth and expression of the recombinant protein Rv2626c of Mycobacterium tuberculosis H37Rv expressed in Streptomyces lividans TK24

Streptomyces lividans, ha ganado gran atención en los últimos tiempos, como vector de expresión y producción de proteínas de Mycobacterium tuberculosis de interés biomédico, como alternativa a su obtención tradicional en E. coli. La proteína Rv2626c, Proteína de Respuesta Hipóxica 1, es codificada por el gen Rv2626c (hrp1) de M. tuberculosis, perteneciente al regulón de la fase de latencia DosR. Esta proteína se sobre-expresa en la fase de latencia de la tuberculosis bajo condiciones de estrés como hipoxia y bajos niveles, de óxido nítrico. Se ha demostrado la inmunogenicidad y capacidad de esta proteína, de inducir citocinas características del patrón Th-1, tales como el interferón gamma. Por ello, nuestro grupo logró la obtención de Rv2626c por la tecnología del ADN recombinante usando como cepa hospedera Streptomyces lividans TK24. Con el objetivo de aumentar el nivel de expresión de la proteína recombinante, rRv2626c en este trabajo se ensayaron diferentes medios de cultivo, evaluando el crecimiento de la cepa transformada en condiciones de zaranda. Se determinó la cinética de crecimiento en el medio definido, formulado industrialmente en el Centro Nacional de Biopreparados: caldo Triptona Soya (TSB-BioCen) y en medio de cultivo equivalente preparado en el laboratorio. Para establecer la cinética de crecimiento, se utilizó el cálculo del peso seco y la determinación de la concentración de proteínas totales por la técnica de ácido bicinconinico (BCA) a diferentes tiempos del cultivo. Posteriormente, se identificó la proteína clonada mediante SDS-PAGE y Western Blotting, así como los niveles de expresión mediante análisis densitométrico. Los resultados indican que se alcanzaron los máximos niveles de densidad celular a las 36 h de cultivo y los más altos niveles de expresión proteica total y específica entre las 42 y 54 h. Con el medio químicamente definido TSB-Biocen preformulado en lugar del preparado en el laboratorio partiendo de los componentes, se logró reducir el tiempo óptimo para la expresión-secreción de la proteína rv2626c de 96 a 54 h. Los mejores resultados en la promoción de la expresión de la proteína recombinante se lograron con el medio definido TSB-BioCen, a las 48 h con 8,5% de rendimiento específico, superando en más de 10 veces los niveles de crecimiento celular obtenidos con el medio elaborado en el laboratorio y más de dos veces los niveles de secreción de la proteína recombinante(AU)

The use of Streptomyces as a bacterial cell factory for the secretory production of bio-active Mycobacterium tuberculosis proteins have gained a lot of attention in recent years, as a convenient alternative to the traditionally used Escherichia coli. The protein Rv2626c protein, also known as Hypoxic Response Protein 1 (HRP1), is encoded by the gene rv2626c (hrp1) of M. tuberculosis which belongs to the Dormancy Safety Regulator (DosR) regulon. This protein is over-expressed during the latency phase of tuberculosis under stress related conditions such as hypoxia and low, non-toxic, levels of nitric oxide and, the immunogenicity and ability to induce cytokines characteristic of the Th-1 pattern of this protein, such as gamma interferon, have been demonstrated. On this basis, our working group, succeeded in obtaining rRv2626c via recombinant DNA technology using Streptomyces lividans TK24 as the host cell. To improve the expression level of the protein, different culture media were used to evaluate the growth of the transformed strain in shaken flask conditions. Growth kinetic for the recombinant strain was evaluated in defined media of preformulated tryptic soya broth (TSB-Biocen), through the determination of dry weight as well as total protein concentration by Bicinconinic acid assay (BCA). Protein identification was done by SDS-PAGE, Western Blot and its expression level by densitometric analysis. Our results indicated a maximal cell density at 36 h of culture, with higher concentration of total and specific protein at 42-54 h in comparison with previous media used. With the chemically defined media a preformulated TSB-Biocen rather than individual components, culture time for expression/secretion of rRv2626c was reduced from 96 h to 54 h. The best results in expression-secretion levels of rv2626c protein were obtained with the TSB-Biocen defined media at 48 h of culture with 8.5% of specific yield. More than 10 fold increase in cellular growth and more than 2 fold increase in specific yield(AU)

Expression of 4"-O-isovaleryltransferase gene from Streptomyces thermotolerans in Streptomyces lividans TK24 / 生物工程学报

4"-O-isovaleryltransferase gene (ist) was regulated by positive regulatory genes of midecamycin 4"-O-propionyltransferase gene (mpt) in Streptomyces lividans TK24. A BamH I ~8.0 kb fragment from Streptomyces mycarofaciens 1748 was proved that it contained mpt gene and linked with two positive regulatory genes, orf27 and orf28. Orf of mpt was replaced by orf of ist and linked with two regulatory genes or orf27 single, and individually cloned into the vectors pKC1139 or pWHM3 (high copy number), and then transformed into S. lividans TK24. The levels of mpt and ist expression were evaluated by the bio-tramsformation efficacy of spiramycin into 4"-O-acylspiramycins in these transformants. The results showed that 4"-O-isovalerylspiramycins could be detected only in the transformants containing the plasmids constructed with pWHM3. The efficacy of bio-transformation of the transformants containing two regulatory genes was higher than that of orf27 single. So, the positive regulatory genes system of mpt gene could enhance ist gene expression.

Heterologous expression and enzymatic analysis of Streptomyces griseus trypsin in Streptomyces lividans / 生物工程学报

Trypsin as an important serine protease has been widely used in food, pharmaceutical and tanning industries. In this study, we successfully expressed trypsin (cloning from Streptomyces griseus ATCC10137) in Streptomyces lividans TK24 and comparatively investigated its enzymatic properties. Specifically, applying S. griseus ATCC 10137 genome as template, we obtained the sprT gene and sub-cloned it into the expression plasmid pIJ86, generating the recombinant strain S. lividans TK24/pIJ86-sprT. When cultivated in R2YE and SELF, the activity of rSGT reached 9.21 U/mL and 8.61 U/mL, respectively. Meanwhile, the results of the enzymatic analysis showed that rSGT exhibited a higher acid tolerance and a higher specificity to hydrolyze amide bonds compared with bovine trypsin (BT). In addition, Zn2+ and organic solvents up-regulated esterase and amidase of rSGT. Taken together, the results obtained herein provide meaningful information for further modification of rSGT and its industrial application.

Twenty years hunting for sulfur in DNA

Here we tell a 20-year long story. It began with an easily overlooked DNA degradation (Dnd) phenomenon during electrophoresis and eventually led to the discovery of an unprecedented DNA sulfur modification governed by five dnd genes. This unusual DNA modification, called phosphorothioation, is the first physiological modification identified on the DNA backbone, in which the nonbridging oxygen is replaced by sulfur in a sequence selective and stereo-specific manner. Homologous dnd gene clusters have been identified in diverse and distantly related bacteria and thus have drawn immediate attention of the entire microbial scientific community. Here, we summarize the progress in chemical, genetic, enzymatic, bioinformatical and analytical aspects of this novel postreplicative DNA modification. We also discuss perspectives on the physiological functions of the DNA phosphorothioate modification in bacteria and their implications.

Activation of silent antibiotic synthesis in Streptomyces lividans by disruption of a negative regulator nsdA, a gene conserved in Streptomyces / 生物工程学报

The global regulatory gene, nsdA, negatively regulates antibiotics production in Streptomyces coelicolor. Southern blot experiment, using an nsdA fragment of S. coelicolor as probe, indicated that nsdA gene existed in many Streptomyces. Primers were designed based on the published sequences of S. coelicolor and S. avermitilis. PCR amplification and sequencing showed that nsdA in Streptomyces was conservative and that of S. lividans ZX64 has a 100% identity in the nucleotide sequence comparing with that of S. coelicolor A3 (2). The nsdA disrupted mutant of S. lividans was constructed named as WQ2. WQ2 was able to produce actinorhodin but the wild-type strain ZX64 did not, which has a silent gene cluster contributing to the biosynthesis of actinorhodin. However, the ability was lost when another copy of the wild nsdA gene was introduced into WQ2. All the results above indicate that nsdA homologous gene is wildly existent and conserved in Streptomyces. And it plays a role in negatively regulating the actinorhodin synthesis in S. lividans and disruption of it can activate the silent gene cluster.