Molecular characterization of severe and mild cases of influenza A (H1N1) 2009 strain from Argentina / Caracterización molecular de cepas de influenza A (H1N1) 2009 de casos leves y graves de la Argentina
Medicina (B.Aires)
;
70(6): 518-523, dic. 2010. ilus, tab
Article
in English
| LILACS
| ID: lil-633799
ABSTRACT
While worldwide pandemic influenza A(H1N1) pdm case fatality rate (CFR) was 0.4%, Argentina's was 4.5%. A total of 34 strains from mild and severe cases were analyzed. A full genome sequencing was carried out on 26 of these, and a partial sequencing on the remaining eight. We observed no evidence that the high CFR can be attributed to direct virus changes. No evidence of re-assortment, mutations associated with resistance to antiviral drugs, or genetic drift that might contribute to virulence was observed. Although the mutation D225G associated with severity in the latest reports from the Ukraine and Norway is not observed among the Argentine strains, an amino acid change in the area (S206T) surrounding the HA receptor binding domain was observed, the same previously established worldwide.
RESUMEN
Mientras que la tasa de letalidad (CFR) para (H1N1)pdm en todo el mundo era del 0.4%, en la Argentina la mortalidad observada fue de 4.5%. La secuenciación del genoma completo de 26 cepas de virus argentinos de influenza A (H1N1)pdm de casos leves y graves y de 8 cepas secuenciadas parcialmente no mostró evidencia de que la elevada tasa de letalidad se pueda atribuir directamente a cambios en el virus. No se encontraron hallazgos de recombinación, de mutaciones asociadas con la resistencia a los medicamentos antivirales ni de variaciones genéticas que puedan contribuir a la virulencia observada. Si bien la mutación D225G asociada con la gravedad, comunicada en informes procedentes de Ucrania y Noruega, no se ha encontrado en las cepas argentinas estudiadas, se ha observado un cambio aminoacídico en la región (S206T) en torno al dominio del sitio de unión al receptor en la HA, el mismo hallado en cepas distribuidas alrededor del mundo.
Full text:
Available
Index:
LILACS (Americas)
Main subject:
DNA, Viral
/
Influenza, Human
/
Influenza A Virus, H1N1 Subtype
/
Mutation
Limits:
Adolescent
/
Adult
/
Child
/
Child, preschool
/
Female
/
Humans
/
Infant
/
Male
Country/Region as subject:
South America
/
Argentina
Language:
English
Journal:
Medicina (B.Aires)
Journal subject:
Medicine
Year:
2010
Type:
Article
/
Project document
Affiliation country:
Argentina
/
United States
Institution/Affiliation country:
454 Life Sciences/US
/
ANLIS Dr. Carlos G. Malbrán/AR
/
Columbia University/US
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