COCAW: A Genome-wide Pattern Search System for Designing Microbial Probes
Genomics & Informatics
;
: 178-180, 2009.
Article
in English
| WPRIM
| ID: wpr-10786
ABSTRACT
A few bioinformatics tools have been used to find out conserved regions as probes. We have developed a system based on a heuristic method with web interfaces to find out conserved regions against microbial genomes. The system runs in real time by using relative entropy in limited narrow regions and detecting similar regions between pair regions with local alignment. The system could be useful to find out conserved regions as genome-wide scale.
Full text:
Available
Index:
WPRIM (Western Pacific)
Main subject:
Genome
/
Computational Biology
/
Entropy
Language:
English
Journal:
Genomics & Informatics
Year:
2009
Type:
Article
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