Comprehensive Transcriptome Profiling of Balding and Non-Balding Scalps in Trichorhinophalangeal Syndrome Type I Patient
Annals of Dermatology
;
: 597-601, 2017.
Article
in English
| WPRIM
| ID: wpr-226482
ABSTRACT
BACKGROUND:
Trichorhinophalangeal syndrome (TRPS) patients tend to have alopecia that appears to be androgenetic, and this genetic model might give clues to the pathogenesis of hair loss or hair morphogenesis.OBJECTIVE:
This study was conducted to identify additional genetic evidence of TRPS and hair morphogenesis from a TRPS patient.METHODS:
From one TRPS type I patient, we extracted RNA and profiled whole transcriptome in non-balding and balding scalp areas using high-throughput RNA sequencing.RESULTS:
We found a total of 26,320 genes, which comprised 14,892 known genes with new isoforms and 4,883 novel genes from the non-balding and balding areas. Among these, a total of 1,242 genes showed different expression in the two scalp areas (p0). Several genes related to the skin and hair, alopecia, and the TRPS1 gene were validated by qRT-PCR. Twelve of 15 genes (KRT6C, KRTAP3-1, MKI67, GPRC5D, TYRP1, DSC1, PMEL, WIF1, SOX21, TINAG, PTGDS, and TRPS1) were down-regulated (10 genes p0.05), and the three other genes (HBA2, GAL, and DES) were up-regulated (p<0.01) in the balding scalp. Many genes related to keratin and hair development were down-regulated in the balding scalp of the TRPS type I patient. In particular, the TRPS1 gene might be related to androgen metabolism and hair morphogenesis.CONCLUSION:
Our result could suggest a novel perspective and evidence to support further study of TRPS and hair morphogenesis.
Full text:
Available
Index:
WPRIM (Western Pacific)
Main subject:
Scalp
/
Skin
/
RNA
/
Protein Isoforms
/
Gene Expression Profiling
/
Alopecia
/
High-Throughput Nucleotide Sequencing
/
Transcriptome
/
Hair
/
Metabolism
Limits:
Humans
Language:
English
Journal:
Annals of Dermatology
Year:
2017
Type:
Article
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