Transcriptome-based bioinformatics analysis of Arnebia euchroma ERF transcription factor family / 中国中药杂志
China Journal of Chinese Materia Medica
;
(24): 4732-4739, 2014.
Article
in Chinese
| WPRIM
| ID: wpr-341825
ABSTRACT
Twenty-seven ERF transcription factor family genes were isolated from Arnebia euchroma, with an average size of 1,010 bp, each gene encoded a 212 amino acids on average. The gene structure and expression of physicochemical properties, subcellular localization, signal peptides, senior structural domains and conservative forecasting, and analysis of A. euchroma were studied comparing with ERF gene gi261363612 of Lithospermum erythrorhizon, and phylogenetic analysis of A. euchroma ERF family was carried out. The results showed the existence of three conserved domains in this family, the senior structure based on random coil and it clustered into CBF/DREB and ERF subfamilies.
Full text:
Available
Index:
WPRIM (Western Pacific)
Main subject:
Phylogeny
/
Plant Proteins
/
Plants, Medicinal
/
Transcription Factors
/
Molecular Sequence Data
/
Chemistry
/
Multigene Family
/
Amino Acid Sequence
/
Cloning, Molecular
/
Sequence Analysis, DNA
Type of study:
Diagnostic study
Language:
Chinese
Journal:
China Journal of Chinese Materia Medica
Year:
2014
Type:
Article
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