Cloning and expression analysis on arginine decarboxylase genes in Atropa belladonna / 中草药

ABSTRACT

Objective: To clone the full-length cDNAs encoding arginine decarboxylase (ADC) from Atropa belladonna, and to characterize the genes at the bioinformatics and expression levels. Methods: cDNAs were used as templates, the full-length cDNAs of ADC in A. belladonna was cloned through rapid amplification of cDNA ends (RACE) technique; Bioinformatics analysis of AbADC genes was performed by BLAST and PBIL on line. The expression levels of the two AbADC genes in different tissues as well as under two different types of stresses were detected based on qPCR analysis. Results: Two ADC genes, namely AbADC1 and AbADC2, were cloned from A. belladonna. AbADC1 was 2 817 bp in length that encoded 712 amino acids with the highest identity of 89% with ADC from Solanum tuberosum; The full-length cDNA of AbADC2 was 2 992 bp in length that encoded 715 amino acids with the highest identity of 90% with ADC from Datura stramonium. The expression level of AbADC1 was significantly higher in secondary roots than that in any other organ, while the AbADC2 expression level was higher in main roots than that in other detected organs. The transcriptional levels of both AbADC1 and AbADC2 were not affected under salinity stress; AbADC2 expression decreased under cold stress, while AbADC1 did not. Conclusion: The cloning and characterization of the cDNAs encoding ADC from A. belladonna are reported for the first time, which provides the new candidate genes for engineering biosynthetic pathway of tropane alkaloids.