Cloning and expression analysis of WRKY5 gene in Dendrobium officinale / 中草药

ABSTRACT

Objective: In order to isolate and analysize the bioinformatics and expression pattern of DoWRKY5 gene from Dendrobium officinale. Methods: A WRKY gene was first obtained by transcriptome sequencing and reverse transcription-polymerase chain reaction (RT-PCR) from D. officinale and analyzed by bioinformatics tools. The tissue expression pattern and the low temperature stress, abscisic acid (ABA) stress, and sucrose stress responses were analyzed by qRT-PCR. Results: The cDNA sequence of DoWRKY5 gene was isolated, which was 1 336 bp in length, with an open reading frame (ORF) of 834 bp and an encoded polypeptide of 277 amino acid. The amino acid sequence contained a conserved WRKY domains and a zinc finger structures (C2H2), belonging to Group II of WRKY family. Expression analysis by qRT-PCR showed that DoWRKY5 was expressed in the roots, stems, and leaves of D. officinale, and the most abundant in leaves. The amount of DoWRKY5 expression were significantly increased under low temperature of 4℃ and different time. Moreover, the expression of DoWRKY5 could be induced by ABA and source. Conclusion: DoWRKY5 may be an important transcription factor to response cold stress and other abiotic stresses in D. officinale, which provides a foundation for further study of cold tolerance mechanism and cold-resistant breeding of D. officinale.