Homology modeling and epitope prediction of Der f 33
Braz. j. med. biol. res
;
51(5): e6213, 2018. tab, graf
Artículo
en Inglés
| LILACS
| ID: biblio-889085
ABSTRACT
Dermatophagoides farinae (Der f), one of the main species of house dust mites, produces more than 30 allergens. A recently identified allergen belonging to the alpha-tubulin protein family, Der f 33, has not been characterized in detail. In this study, we used bioinformatics tools to construct the secondary and tertiary structures and predict the B and T cell epitopes of Der f 33. First, protein attribution, protein patterns, and physicochemical properties were predicted. Then, a reasonable tertiary structure was constructed by homology modeling. In addition, six B cell epitopes (amino acid positions 34-45, 63-67, 103-108, 224-230, 308-316, and 365-377) and four T cell epitopes (positions 178-186, 241-249, 335-343, and 402-410) were predicted. These results established a theoretical basis for further studies and eventual epitope-based vaccine design against Der f 33.
Texto completo:
Disponible
Índice:
LILACS (Américas)
Asunto principal:
Tubulina (Proteína)
/
Alérgenos
/
Epítopos de Linfocito T
/
Epítopos de Linfocito B
/
Dermatophagoides farinae
/
Antígenos Dermatofagoides
Tipo de estudio:
Estudio pronóstico
/
Factores de riesgo
Límite:
Animales
Idioma:
Inglés
Revista:
Braz. j. med. biol. res
Asunto de la revista:
Biologia
/
Medicina
Año:
2018
Tipo del documento:
Artículo
/
Documento de proyecto
País de afiliación:
China
Institución/País de afiliación:
Jiangsu Vocational College of Medicine/CN
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