Extension of the IsaViz software for the representation of metabolic and regulatory networks
Braz. arch. biol. technol
;
48(spe): 197-205, June 2005. ilus
Article
Dans Anglais
| LILACS
| ID: lil-415475
ABSTRACT
In this work we developed an extension of IsaViz software, a RDF (Resource Description Framework) authoring tool, designed to be a graphical environment to build models of metabolic and regulatory networks. This environment, called Metabolic IsaViz, was linked to a genomic library of types and was modeled on the basis of ontologies. Biochemical pathways included data at sequence level (e.g., the amino acid sequence of enzymes), besides kinetic and thermodynamic parameters for the reactions. Models created with Metabolic IsaViz could be exported to pathways simulators through SBML (Systems Biology Markup Language), which allowed to analyze the pathway dynamics of target chemicals.
Texte intégral:
Disponible
Indice:
LILAS (Amériques)
langue:
Anglais
Texte intégral:
Braz. arch. biol. technol
Thème du journal:
Biologie
Année:
2005
Type:
Article
/
Congrès et conférence
Pays d'affiliation:
Brésil
Institution/Pays d'affiliation:
Grupo de Engenharia Genômica/BR
/
Universidade Federal de Santa Catarina/BR
Documents relatifs à ce sujet
MEDLINE
...
LILACS
LIS