PDB-Metrics: a web tool for exploring the PDB contents
Genet. mol. res. (Online)
;
5(2): 333-341, 2006. ilus, tab
Article
Dans Anglais
| LILACS
| ID: lil-442565
ABSTRACT
PDB-Metrics (http//sms.cbi.cnptia.embrapa.br/SMS/pdb_metrics/index.html) is a component of the Diamond STING suite of programs for the analysis of protein sequence, structure and function. It summarizes the characteristics of the collection of protein structure descriptions deposited in the Protein Data Bank (PDB) and provides a Web interface to search and browse the PDB, using a variety of alternative criteria. PDB-Metrics is a powerful tool for bioinformaticians to examine the data span in the PDB from several perspectives. Although other Web sites offer some similar resources to explore the PDB contents, PDB-Metrics is among those with the most complete set of such facilities, integrated into a single Web site. This program has been developed using SQLite, a C library that provides all the query facilities of a database management system
Texte intégral:
Disponible
Indice:
LILAS (Amériques)
Sujet Principal:
Logiciel
/
Protéines
/
Bases de données factuelles
/
Internet
/
Analyse de séquence de protéine
/
Bases de données de protéines
langue:
Anglais
Texte intégral:
Genet. mol. res. (Online)
Thème du journal:
Biologie moléculaire
/
Génétique
Année:
2006
Type:
Article
Pays d'affiliation:
Brésil
Institution/Pays d'affiliation:
Embrapa Information Technology/BR
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