ORF Miner: a Web-based ORF Search Tool
Genomics & Informatics
;
: 217-219, 2009.
Artigo
em Inglês
| WPRIM
| ID: wpr-202571
ABSTRACT
The primary clue for locating protein-coding regions is the open reading frame and the determination of ORFs (Open Reading Frames) is the first step toward the gene prediction, especially for prokaryotes. In this respect, we have developed a web-based ORF search tool called ORF Miner. The ORF Miner is a graphical analysis utility which determines all possible open reading frames of a selectable minimum size in an input sequence. This tool identifies all open reading frames using alternative genetic codes as well as the standard one and reports a list of ORFs with corresponding deduced amino acid sequences. The ORF Miner can be employed for sequence annotation and give a crucial clue to determination of actual protein-coding regions.
Texto completo:
DisponíveL
Índice:
WPRIM (Pacífico Ocidental)
Assunto principal:
Fases de Leitura Aberta
/
Sequência de Aminoácidos
/
Cimentos de Resina
/
Ectima Contagioso
/
Código Genético
Limite:
Animais
Idioma:
Inglês
Revista:
Genomics & Informatics
Ano de publicação:
2009
Tipo de documento:
Artigo
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