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Making science computable: Developing code systems for statistics, study design, and risk of bias.
Alper, Brian S; Dehnbostel, Joanne; Afzal, Muhammad; Subbian, Vignesh; Soares, Andrey; Kunnamo, Ilkka; Shahin, Khalid; McClure, Robert C.
  • Alper BS; Computable Publishing LLC, Ipswich, MA, United States. Electronic address: balper@computablepublishing.com.
  • Dehnbostel J; Computable Publishing LLC, Ipswich, MA, United States. Electronic address: jdehnbostel@computablepublishing.com.
  • Afzal M; Sejong University, Seoul, South Korea. Electronic address: mafzal@sejong.ac.kr.
  • Subbian V; The University of Arizona, Tucson, AZ, United States. Electronic address: vsubbian@arizona.edu.
  • Soares A; University of Colorado, Aurora, CO, United States. Electronic address: andrey.soares@cuanschutz.edu.
  • Kunnamo I; Duodecim Medical Publications Ltd, Helsinki, Finland. Electronic address: ilkka.kunnamo@duodecim.fi.
  • Shahin K; Computable Publishing LLC, Ipswich, MA, United States. Electronic address: kshahin@computablepublishing.com.
  • McClure RC; MD Partners, Inc., Lafayette, CO, United States. Electronic address: rmcclure@mdpartners.com.
J Biomed Inform ; 115: 103685, 2021 03.
Article in English | MEDLINE | ID: covidwho-1039434
ABSTRACT
The COVID-19 crisis led a group of scientific and informatics experts to accelerate development of an infrastructure for electronic data exchange for the identification, processing, and reporting of scientific findings. The Fast Healthcare Interoperability Resources (FHIR®) standard which is overcoming the interoperability problems in health information exchange was extended to evidence-based medicine (EBM) knowledge with the EBMonFHIR project. A 13-step Code System Development Protocol was created in September 2020 to support global development of terminologies for exchange of scientific evidence. For Step 1, we assembled expert working groups with 55 people from 26 countries by October 2020. For Step 2, we identified 23 commonly used tools and systems for which the first version of code systems will be developed. For Step 3, a total of 368 non-redundant concepts were drafted to become display terms for four code systems (Statistic Type, Statistic Model, Study Design, Risk of Bias). Steps 4 through 13 will guide ongoing development and maintenance of these terminologies for scientific exchange. When completed, the code systems will facilitate identifying, processing, and reporting research results and the reliability of those results. More efficient and detailed scientific communication will reduce cost and burden and improve health outcomes, quality of life, and patient, caregiver, and healthcare professional satisfaction. We hope the achievements reached thus far will outlive COVID-19 and provide an infrastructure to make science computable for future generations. Anyone may join the effort at https//www.gps.health/covid19_knowledge_accelerator.html.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Bias Type of study: Experimental Studies / Observational study / Prognostic study / Randomized controlled trials / Systematic review/Meta Analysis Limits: Adolescent / Adult / Aged / Female / Humans / Male / Middle aged / Young adult Language: English Journal: J Biomed Inform Journal subject: Medical Informatics Year: 2021 Document Type: Article

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Bias Type of study: Experimental Studies / Observational study / Prognostic study / Randomized controlled trials / Systematic review/Meta Analysis Limits: Adolescent / Adult / Aged / Female / Humans / Male / Middle aged / Young adult Language: English Journal: J Biomed Inform Journal subject: Medical Informatics Year: 2021 Document Type: Article