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A citizen science initiative for open data and visualization of COVID-19 outbreak in Kerala, India.
Ulahannan, Jijo Pulickiyil; Narayanan, Nikhil; Thalhath, Nishad; Prabhakaran, Prem; Chaliyeduth, Sreekanth; Suresh, Sooraj P; Mohammed, Musfir; Rajeevan, E; Joseph, Sindhu; Balakrishnan, Akhil; Uthaman, Jeevan; Karingamadathil, Manoj; Thomas, Sunil Thonikkuzhiyil; Sureshkumar, Unnikrishnan; Balan, Shabeesh; Vellichirammal, Neetha Nanoth.
  • Ulahannan JP; Department of Physics, Government College Kasaragod, Kannur University, Kannur, India.
  • Narayanan N; Open Data Researcher, Bengaluru, India.
  • Thalhath N; School of Library, Information and Media Studies, University of Tsukuba, Tsukuba, Japan.
  • Prabhakaran P; Department of Advanced Materials and Chemical Engineering, Hannam University, Daejeon, South Korea.
  • Chaliyeduth S; Centre for Cognitive and Brain Sciences, Indian Institute of Technology Gandhinagar, Gandhinagar, India.
  • Suresh SP; Department of Humanities and Social Sciences, National Institute of Technology Tiruchirappalli, Tiruchirappalli, India.
  • Mohammed M; Embedded Analytics, ML and Data Sciences, Experion Technologies, Thiruvananthapuram, India.
  • Rajeevan E; Department of Philosophy, Government Brennen College, Kannur University, Kannur, India.
  • Joseph S; Department of Travel and Tourism Management, Govinda Pai Memorial Government College, Kannur University, Kannur, India.
  • Balakrishnan A; Software Research and Development Team, Crowcon, Bengaluru, India.
  • Uthaman J; Department of Marine Geophysics, Cochin University of Science and Technology, Kochi, India.
  • Karingamadathil M; Swathanthra Malayalam Computing, Thrissur, India.
  • Thomas ST; Department of Electronics, College of Engineering Attingal, APJ Abdul Kalam Technical University, Thiruvananthapuram, India.
  • Sureshkumar U; Astronomical Observatory of the Jagiellonian University, Faculty of Physics, Astronomy and Applied Science, Jagiellonian University, Kraków, Poland.
  • Balan S; Laboratory for Molecular Psychiatry, RIKEN Center for Brain Science, Wako, Japan.
  • Vellichirammal NN; Department of Genetics, Cell Biology and Anatomy, University of Nebraska Medical Center, Omaha, Nebraska, USA.
J Am Med Inform Assoc ; 27(12): 1913-1920, 2020 12 09.
Article in English | MEDLINE | ID: covidwho-1060085
Preprint
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ABSTRACT

OBJECTIVE:

India reported its first coronavirus disease 2019 (COVID-19) case in the state of Kerala and an outbreak initiated subsequently. The Department of Health Services, Government of Kerala, initially released daily updates through daily textual bulletins for public awareness to control the spread of the disease. However, these unstructured data limit upstream applications, such as visualization, and analysis, thus demanding refinement to generate open and reusable datasets. MATERIALS AND

METHODS:

Through a citizen science initiative, we leveraged publicly available and crowd-verified data on COVID-19 outbreak in Kerala from the government bulletins and media outlets to generate reusable datasets. This was further visualized as a dashboard through a front-end Web application and a JSON (JavaScript Object Notation) repository, which serves as an application programming interface for the front end.

RESULTS:

From the sourced data, we provided real-time analysis, and daily updates of COVID-19 cases in Kerala, through a user-friendly bilingual dashboard (https//covid19kerala.info/) for nonspecialists. To ensure longevity and reusability, the dataset was deposited in an open-access public repository for future analysis. Finally, we provide outbreak trends and demographic characteristics of the individuals affected with COVID-19 in Kerala during the first 138 days of the outbreak.

DISCUSSION:

We anticipate that our dataset can form the basis for future studies, supplemented with clinical and epidemiological data from the individuals affected with COVID-19 in Kerala.

CONCLUSIONS:

We reported a citizen science initiative on the COVID-19 outbreak in Kerala to collect and deposit data in a structured format, which was utilized for visualizing the outbreak trend and describing demographic characteristics of affected individuals.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Computer Graphics / Pandemics / Datasets as Topic / Citizen Science / COVID-19 Type of study: Observational study / Prognostic study / Qualitative research Limits: Adolescent / Adult / Aged / Child / Female / Humans / Male / Middle aged / Young adult Country/Region as subject: Asia Language: English Journal: J Am Med Inform Assoc Journal subject: Medical Informatics Year: 2020 Document Type: Article Affiliation country: Jamia

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Computer Graphics / Pandemics / Datasets as Topic / Citizen Science / COVID-19 Type of study: Observational study / Prognostic study / Qualitative research Limits: Adolescent / Adult / Aged / Child / Female / Humans / Male / Middle aged / Young adult Country/Region as subject: Asia Language: English Journal: J Am Med Inform Assoc Journal subject: Medical Informatics Year: 2020 Document Type: Article Affiliation country: Jamia