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Peripheral blood microRNAs and the COVID-19 patient: methodological considerations, technical challenges and practice points.
Pinilla, Lucía; Benitez, Ivan D; González, Jessica; Torres, Gerard; Barbé, Ferran; de Gonzalo-Calvo, David.
  • Pinilla L; Translational Research in Respiratory Medicine, University Hospital Arnau de Vilanova and Santa Maria, IRBLleida, Lleida, Spain.
  • Benitez ID; CIBER of Respiratory Diseases (CIBERES), Institute of Health Carlos III, Madrid, Spain.
  • González J; Translational Research in Respiratory Medicine, University Hospital Arnau de Vilanova and Santa Maria, IRBLleida, Lleida, Spain.
  • Torres G; CIBER of Respiratory Diseases (CIBERES), Institute of Health Carlos III, Madrid, Spain.
  • Barbé F; CIBER of Respiratory Diseases (CIBERES), Institute of Health Carlos III, Madrid, Spain.
  • de Gonzalo-Calvo D; Respiratory Department, University Hospital Arnau de Vilanova-Santa María, Translational Research in Respiratory Medicine, IRBLleida, University of Lleida, Lleida, Spain.
RNA Biol ; 18(5): 688-695, 2021 05.
Article in English | MEDLINE | ID: covidwho-1061120
ABSTRACT
The COVID-19 emergency pandemic resulting from infection with SARS-CoV-2 represents a major threat to public health worldwide. There is an urgent clinical demand for easily accessible tools to address weaknesses and gaps in the management of COVID-19 patients. In this context, transcriptomic profiling of liquid biopsies, especially microRNAs (miRNAs), has recently emerged as a robust source of potential clinical indicators for medical decision-making. Nevertheless, the analysis of the circulating miRNA signature and its translation to clinical practice requires strict control of a wide array of methodological details. In this review, we indicate the main methodological aspects that should be addressed when evaluating the circulating miRNA profiles in COVID-19 patients, from preanalytical and analytical variables to the experimental design, impact of confounding, analysis of the data and interpretation of the findings, among others. Additionally, we provide practice points to ensure the rigour and reproducibility of miRNA-based biomarker investigations of this condition.Abbreviations ACE angiotensin-converting enzyme; ARDS acute respiratory distress syndrome; COVID-19 coronavirus disease 2019; ERDN early Detection Research Network; LMWH low molecular weight heparin; miRNA microRNA; ncRNA noncoding RNA; SARS-CoV-2 severe acute respiratory syndrome coronavirus-2; SOP standard operating procedure.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Gene Expression Profiling / MicroRNAs / SARS-CoV-2 / COVID-19 Type of study: Experimental Studies / Prognostic study Limits: Humans Language: English Journal: RNA Biol Journal subject: Molecular Biology Year: 2021 Document Type: Article Affiliation country: 15476286.2021.1885188

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Gene Expression Profiling / MicroRNAs / SARS-CoV-2 / COVID-19 Type of study: Experimental Studies / Prognostic study Limits: Humans Language: English Journal: RNA Biol Journal subject: Molecular Biology Year: 2021 Document Type: Article Affiliation country: 15476286.2021.1885188