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Assessing the feasibility and effectiveness of household-pooled universal testing to control COVID-19 epidemics.
Libin, Pieter J K; Willem, Lander; Verstraeten, Timothy; Torneri, Andrea; Vanderlocht, Joris; Hens, Niel.
  • Libin PJK; Interuniversity Institute of Biostatistics and statistical Bioinformatics, Data Science Institute, Hasselt University, Hasselt, Belgium.
  • Willem L; Artificial Intelligence Lab, Department of computer science, Vrije Universiteit Brussel, Brussels, Belgium.
  • Verstraeten T; KU Leuven - University of Leuven, Department of Microbiology and Immunology, Rega Institute for Medical Research, Clinical and Epidemiological Virology, Leuven, Belgium.
  • Torneri A; Centre for Health Economics Research and Modelling Infectious Diseases, Vaccine and Infectious Disease Institute, University of Antwerp, Antwerp, Belgium.
  • Vanderlocht J; Artificial Intelligence Lab, Department of computer science, Vrije Universiteit Brussel, Brussels, Belgium.
  • Hens N; Interuniversity Institute of Biostatistics and statistical Bioinformatics, Data Science Institute, Hasselt University, Hasselt, Belgium.
PLoS Comput Biol ; 17(3): e1008688, 2021 03.
Article in English | MEDLINE | ID: covidwho-1125385
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ABSTRACT
Outbreaks of SARS-CoV-2 are threatening the health care systems of several countries around the world. The initial control of SARS-CoV-2 epidemics relied on non-pharmaceutical interventions, such as social distancing, teleworking, mouth masks and contact tracing. However, as pre-symptomatic transmission remains an important driver of the epidemic, contact tracing efforts struggle to fully control SARS-CoV-2 epidemics. Therefore, in this work, we investigate to what extent the use of universal testing, i.e., an approach in which we screen the entire population, can be utilized to mitigate this epidemic. To this end, we rely on PCR test pooling of individuals that belong to the same households, to allow for a universal testing procedure that is feasible with the limited testing capacity. We evaluate two isolation strategies on the one hand pool isolation, where we isolate all individuals that belong to a positive PCR test pool, and on the other hand individual isolation, where we determine which of the individuals that belong to the positive PCR pool are positive, through an additional testing step. We evaluate this universal testing approach in the STRIDE individual-based epidemiological model in the context of the Belgian COVID-19 epidemic. As the organisation of universal testing will be challenging, we discuss the different aspects related to sample extraction and PCR testing, to demonstrate the feasibility of universal testing when a decentralized testing approach is used. We show through simulation, that weekly universal testing is able to control the epidemic, even when many of the contact reductions are relieved. Finally, our model shows that the use of universal testing in combination with stringent contact reductions could be considered as a strategy to eradicate the virus.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Epidemics / COVID-19 Nucleic Acid Testing / SARS-CoV-2 / COVID-19 Type of study: Experimental Studies / Observational study Limits: Humans Country/Region as subject: Europa Language: English Journal: PLoS Comput Biol Journal subject: Biology / Medical Informatics Year: 2021 Document Type: Article Affiliation country: Journal.pcbi.1008688

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Epidemics / COVID-19 Nucleic Acid Testing / SARS-CoV-2 / COVID-19 Type of study: Experimental Studies / Observational study Limits: Humans Country/Region as subject: Europa Language: English Journal: PLoS Comput Biol Journal subject: Biology / Medical Informatics Year: 2021 Document Type: Article Affiliation country: Journal.pcbi.1008688