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The DIOS framework for optimizing infectious disease surveillance: Numerical methods for simulation and multi-objective optimization of surveillance network architectures.
Cheng, Qu; Collender, Philip A; Heaney, Alexandra K; Li, Xintong; Dasan, Rohini; Li, Charles; Lewnard, Joseph A; Zelner, Jonathan L; Liang, Song; Chang, Howard H; Waller, Lance A; Lopman, Benjamin A; Yang, Changhong; Remais, Justin V.
  • Cheng Q; Division of Environmental Health Sciences, School of Public Health, University of California, Berkeley, Berkeley, California, United States of America.
  • Collender PA; Division of Environmental Health Sciences, School of Public Health, University of California, Berkeley, Berkeley, California, United States of America.
  • Heaney AK; Division of Environmental Health Sciences, School of Public Health, University of California, Berkeley, Berkeley, California, United States of America.
  • Li X; Department of Biostatistics and Bioinformatics, Rollins School of Public Health, Emory University, Atlanta, Georgia, United States of America.
  • Dasan R; Division of Environmental Health Sciences, School of Public Health, University of California, Berkeley, Berkeley, California, United States of America.
  • Li C; Division of Environmental Health Sciences, School of Public Health, University of California, Berkeley, Berkeley, California, United States of America.
  • Lewnard JA; Division of Epidemiology, School of Public Health, University of California, Berkeley, Berkeley, California, United States of America.
  • Zelner JL; Department of Epidemiology, School of Public Health, University of Michigan, Ann Arbor, Michigan, United States of America.
  • Liang S; Center for Social Epidemiology and Population Health, School of Public Health, University of Michigan School of Public Health, Ann Arbor, Michigan, United States of America.
  • Chang HH; Department of Environmental and Global Health, College of Public Health and Health Professions, and Emerging Pathogens Institute, University of Florida, Gainesville, Florida, United States of America.
  • Waller LA; Department of Biostatistics and Bioinformatics, Rollins School of Public Health, Emory University, Atlanta, Georgia, United States of America.
  • Lopman BA; Department of Biostatistics and Bioinformatics, Rollins School of Public Health, Emory University, Atlanta, Georgia, United States of America.
  • Yang C; Department of Epidemiology, Rollins School of Public Health, Emory University, Atlanta, Georgia, United States of America.
  • Remais JV; Institute of Health Informatics, Sichuan Center for Disease Control and Prevention, Chengdu, Sichuan, People's Republic of China.
PLoS Comput Biol ; 16(12): e1008477, 2020 12.
Article in English | MEDLINE | ID: covidwho-1146431
ABSTRACT
Infectious disease surveillance systems provide vital data for guiding disease prevention and control policies, yet the formalization of methods to optimize surveillance networks has largely been overlooked. Decisions surrounding surveillance design parameters-such as the number and placement of surveillance sites, target populations, and case definitions-are often determined by expert opinion or deference to operational considerations, without formal analysis of the influence of design parameters on surveillance objectives. Here we propose a simulation framework to guide evidence-based surveillance network design to better achieve specific surveillance goals with limited resources. We define evidence-based surveillance design as an optimization problem, acknowledging the many operational constraints under which surveillance systems operate, the many dimensions of surveillance system design, the multiple and competing goals of surveillance, and the complex and dynamic nature of disease systems. We describe an analytical framework-the Disease Surveillance Informatics Optimization and Simulation (DIOS) framework-for the identification of optimal surveillance designs through mathematical representations of disease and surveillance processes, definition of objective functions, and numerical optimization. We then apply the framework to the problem of selecting candidate sites to expand an existing surveillance network under alternative objectives of (1) improving spatial prediction of disease prevalence at unmonitored sites; or (2) estimating the observed effect of a risk factor on disease. Results of this demonstration illustrate how optimal designs are sensitive to both surveillance goals and the underlying spatial pattern of the target disease. The findings affirm the value of designing surveillance systems through quantitative and adaptive analysis of network characteristics and performance. The framework can be applied to the design of surveillance systems tailored to setting-specific disease transmission dynamics and surveillance needs, and can yield improved understanding of tradeoffs between network architectures.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Computer Simulation / Population Surveillance / Communicable Diseases / Data Interpretation, Statistical Type of study: Observational study / Prognostic study Limits: Humans Language: English Journal: PLoS Comput Biol Journal subject: Biology / Medical Informatics Year: 2020 Document Type: Article Affiliation country: Journal.pcbi.1008477

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Computer Simulation / Population Surveillance / Communicable Diseases / Data Interpretation, Statistical Type of study: Observational study / Prognostic study Limits: Humans Language: English Journal: PLoS Comput Biol Journal subject: Biology / Medical Informatics Year: 2020 Document Type: Article Affiliation country: Journal.pcbi.1008477