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Using the PhenX Toolkit to Select Standard Measurement Protocols for Your Research Study.
Cox, Lisa Ann; Hwang, Stephen; Haines, Jonathan; Ramos, Erin M; McCarty, Catherine A; Marazita, Mary L; Engle, Michelle L; Hendershot, Tabitha; Pan, Huaqin Helen; Hamilton, Carol M.
  • Cox LA; RTI International, Research Triangle Park, North Carolina.
  • Hwang S; RTI International, Research Triangle Park, North Carolina.
  • Haines J; Department of Population & Quantitative Health Sciences, Cleveland Institute for Computational Biology, Case Western Reserve University, Cleveland, Ohio.
  • Ramos EM; National Human Genome Research Institute (NHGRI), Bethesda, Maryland.
  • McCarty CA; University of Minnesota Medical School, Duluth Campus, Duluth, Minnesota.
  • Marazita ML; Center for Craniofacial and Dental Genetics, Department of Oral and Craniofacial Sciences, School of Dental Medicine; Department of Human Genetics, Graduate School of Public Health; and Clinical and Translational Science, School of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania.
  • Engle ML; RTI International, Research Triangle Park, North Carolina.
  • Hendershot T; RTI International, Research Triangle Park, North Carolina.
  • Pan HH; RTI International, Research Triangle Park, North Carolina.
  • Hamilton CM; RTI International, Research Triangle Park, North Carolina.
Curr Protoc ; 1(5): e149, 2021 May.
Article in English | MEDLINE | ID: covidwho-1242712
ABSTRACT
The goals of PhenX (consensus measures for Phenotypes and eXposures) are to promote the use of standard measurement protocols and to help investigators identify opportunities for collaborative research and cross-study analysis, thus increasing the impact of individual studies. The PhenX Toolkit (https//www.phenxtoolkit.org/) offers high-quality, well-established measurement protocols to assess phenotypes and exposures in studies with human participants. The Toolkit contains protocols representing 29 research domains and 6 specialty collections of protocols that add depth to the Toolkit in specific research areas (e.g., COVID-19, Social Determinants of Health [SDoH], Blood Sciences Research [BSR], Mental Health Research [MHR], Tobacco Regulatory Research [TRR], and Substance Abuse and Addiction [SAA]). Protocols are recommended for inclusion in the PhenX Toolkit by Working Groups of domain experts using a consensus process that includes input from the scientific community. For each PhenX protocol, the Toolkit provides a detailed description, the rationale for inclusion, and supporting documentation. Users can browse protocols in the Toolkit, search the Toolkit using keywords, or use Browse Protocols Tree to identify protocols of interest. The PhenX Toolkit provides data dictionaries compatible with the database of Genotypes and Phenotypes (dbGaP), Research Electronic Data Capture (REDCap) data submission compatibility, and data collection worksheets to help investigators incorporate PhenX protocols into their study design. The PhenX Toolkit provides resources to help users identify published studies that used PhenX protocols. © 2021 The Authors. Current Protocols published by Wiley Periodicals LLC. Basic Protocol Using the PhenX Toolkit to support or extend study design.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Software / Databases as Topic / Interdisciplinary Research / Genome-Wide Association Study / Human Genetics Type of study: Experimental Studies / Randomized controlled trials Limits: Humans Language: English Journal: Curr Protoc Year: 2021 Document Type: Article

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Software / Databases as Topic / Interdisciplinary Research / Genome-Wide Association Study / Human Genetics Type of study: Experimental Studies / Randomized controlled trials Limits: Humans Language: English Journal: Curr Protoc Year: 2021 Document Type: Article