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Targeted metabolomics identifies high performing diagnostic and prognostic biomarkers for COVID-19.
López-Hernández, Yamilé; Monárrez-Espino, Joel; Oostdam, Ana-Sofía Herrera-van; Delgado, Julio Enrique Castañeda; Zhang, Lun; Zheng, Jiamin; Valdez, Juan José Oropeza; Mandal, Rupasri; González, Fátima de Lourdes Ochoa; Moreno, Juan Carlos Borrego; Trejo-Medinilla, Flor M; López, Jesús Adrián; Moreno, José Antonio Enciso; Wishart, David S.
  • López-Hernández Y; Cátedras-CONACyT, Consejo Nacional de Ciencia y Tecnologia, 03940, México, México. ylopezher@conacyt.mx.
  • Monárrez-Espino J; Autonomous University of Zacatecas, 98000, Zacatecas, Mexico. ylopezher@conacyt.mx.
  • Oostdam AH; Christus Muguerza Hospital Chihuahua-University of Monterrey, 31000, Chihuahua, Mexico. jmonarrez@hotmail.com.
  • Delgado JEC; Faculty of Medicine, Autonomous University of San Luis Potosí, 78210, San Luis Potosi, Mexico.
  • Zhang L; Cátedras-CONACyT, Consejo Nacional de Ciencia y Tecnologia, 03940, México, México.
  • Zheng J; Unidad de Investigación Biomédica de Zacatecas, Instituto Mexicano del Seguro Social, 98000, Zacatecas, México.
  • Valdez JJO; The Metabolomics Innovation Center, University of Alberta, Edmonton, AB, T6G1C9, Canada.
  • Mandal R; The Metabolomics Innovation Center, University of Alberta, Edmonton, AB, T6G1C9, Canada.
  • González FLO; Unidad de Investigación Biomédica de Zacatecas, Instituto Mexicano del Seguro Social, 98000, Zacatecas, México.
  • Moreno JCB; The Metabolomics Innovation Center, University of Alberta, Edmonton, AB, T6G1C9, Canada.
  • Trejo-Medinilla FM; Unidad de Investigación Biomédica de Zacatecas, Instituto Mexicano del Seguro Social, 98000, Zacatecas, México.
  • López JA; Doctorado en Ciencias Básicas, Universidad Autónoma de Zacatecas, Zacatecas, México.
  • Moreno JAE; Departmento de Epidemiología, Hospital General de Zona #1 "Emilio Varela Luján", Instituto Mexicano del Seguro Social, 98000, Zacatecas, México.
  • Wishart DS; Autonomous University of Zacatecas, 98000, Zacatecas, Mexico.
Sci Rep ; 11(1): 14732, 2021 07 19.
Article in English | MEDLINE | ID: covidwho-1317815
ABSTRACT
Research exploring the development and outcome of COVID-19 infections has led to the need to find better diagnostic and prognostic biomarkers. This cross-sectional study used targeted metabolomics to identify potential COVID-19 biomarkers that predicted the course of the illness by assessing 110 endogenous plasma metabolites from individuals admitted to a local hospital for diagnosis/treatment. Patients were classified into four groups (≈ 40 each) according to standard polymerase chain reaction (PCR) COVID-19 testing and disease course PCR-/controls (i.e., non-COVID controls), PCR+/not-hospitalized, PCR+/hospitalized, and PCR+/intubated. Blood samples were collected within 2 days of admission/PCR testing. Metabolite concentration data, demographic data and clinical data were used to propose biomarkers and develop optimal regression models for the diagnosis and prognosis of COVID-19. The area under the receiver operating characteristic curve (AUC; 95% CI) was used to assess each models' predictive value. A panel that included the kynurenine tryptophan ratio, lysoPC a C260, and pyruvic acid discriminated non-COVID controls from PCR+/not-hospitalized (AUC = 0.947; 95% CI 0.931-0.962). A second panel consisting of C102, butyric acid, and pyruvic acid distinguished PCR+/not-hospitalized from PCR+/hospitalized and PCR+/intubated (AUC = 0.975; 95% CI 0.968-0.983). Only lysoPC a C280 differentiated PCR+/hospitalized from PCR+/intubated patients (AUC = 0.770; 95% CI 0.736-0.803). If additional studies with targeted metabolomics confirm the diagnostic value of these plasma biomarkers, such panels could eventually be of clinical use in medical practice.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Biomarkers / Metabolomics / COVID-19 Type of study: Diagnostic study / Experimental Studies / Observational study / Prognostic study / Randomized controlled trials Limits: Adult / Female / Humans / Male / Middle aged Language: English Journal: Sci Rep Year: 2021 Document Type: Article

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Biomarkers / Metabolomics / COVID-19 Type of study: Diagnostic study / Experimental Studies / Observational study / Prognostic study / Randomized controlled trials Limits: Adult / Female / Humans / Male / Middle aged Language: English Journal: Sci Rep Year: 2021 Document Type: Article