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Epidemic mitigation by statistical inference from contact tracing data.
Baker, Antoine; Biazzo, Indaco; Braunstein, Alfredo; Catania, Giovanni; Dall'Asta, Luca; Ingrosso, Alessandro; Krzakala, Florent; Mazza, Fabio; Mézard, Marc; Muntoni, Anna Paola; Refinetti, Maria; Sarao Mannelli, Stefano; Zdeborová, Lenka.
  • Baker A; Laboratoire de Physique de l'Ecole Normale Supérieure, Université Paris Sciences & Lettres, CNRS, Sorbonne Université, Université Paris-Diderot, Sorbonne Paris Cité, 75005 Paris, France.
  • Biazzo I; Department of Applied Science and Technology, Politecnico di Torino, 10129 Torino, Italy.
  • Braunstein A; Department of Applied Science and Technology, Politecnico di Torino, 10129 Torino, Italy; alfredo.braunstein@polito.it lenka.zdeborova@epfl.ch.
  • Catania G; Italian Institute for Genomic Medicine, 10060 Torino, Italy.
  • Dall'Asta L; Collegio Carlo Alberto, 10122 Torino, Italy.
  • Ingrosso A; Istituto Nazionale di Fisica Nucleare (INFN) Sezione di Torino, 10125 Torino, Italy.
  • Krzakala F; Department of Applied Science and Technology, Politecnico di Torino, 10129 Torino, Italy.
  • Mazza F; Department of Applied Science and Technology, Politecnico di Torino, 10129 Torino, Italy.
  • Mézard M; Collegio Carlo Alberto, 10122 Torino, Italy.
  • Muntoni AP; Istituto Nazionale di Fisica Nucleare (INFN) Sezione di Torino, 10125 Torino, Italy.
  • Refinetti M; The Abdus Salam International Centre for Theoretical Physics, 34151 Trieste, Italy.
  • Sarao Mannelli S; Laboratoire de Physique de l'Ecole Normale Supérieure, Université Paris Sciences & Lettres, CNRS, Sorbonne Université, Université Paris-Diderot, Sorbonne Paris Cité, 75005 Paris, France.
  • Zdeborová L; Information, Learning and Physics Laboratory, Ecole Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.
Proc Natl Acad Sci U S A ; 118(32)2021 08 10.
Article in English | MEDLINE | ID: covidwho-1327246
ABSTRACT
Contact tracing is an essential tool to mitigate the impact of a pandemic, such as the COVID-19 pandemic. In order to achieve efficient and scalable contact tracing in real time, digital devices can play an important role. While a lot of attention has been paid to analyzing the privacy and ethical risks of the associated mobile applications, so far much less research has been devoted to optimizing their performance and assessing their impact on the mitigation of the epidemic. We develop Bayesian inference methods to estimate the risk that an individual is infected. This inference is based on the list of his recent contacts and their own risk levels, as well as personal information such as results of tests or presence of syndromes. We propose to use probabilistic risk estimation to optimize testing and quarantining strategies for the control of an epidemic. Our results show that in some range of epidemic spreading (typically when the manual tracing of all contacts of infected people becomes practically impossible but before the fraction of infected people reaches the scale where a lockdown becomes unavoidable), this inference of individuals at risk could be an efficient way to mitigate the epidemic. Our approaches translate into fully distributed algorithms that only require communication between individuals who have recently been in contact. Such communication may be encrypted and anonymized, and thus, it is compatible with privacy-preserving standards. We conclude that probabilistic risk estimation is capable of enhancing the performance of digital contact tracing and should be considered in the mobile applications.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Contact Tracing / Epidemics Type of study: Observational study / Prognostic study Limits: Humans Language: English Year: 2021 Document Type: Article Affiliation country: Pnas.2106548118

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Contact Tracing / Epidemics Type of study: Observational study / Prognostic study Limits: Humans Language: English Year: 2021 Document Type: Article Affiliation country: Pnas.2106548118