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Validating deep learning inference during chest X-ray classification for COVID-19 screening.
Sadre, Robbie; Sundaram, Baskaran; Majumdar, Sharmila; Ushizima, Daniela.
  • Sadre R; Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
  • Sundaram B; Department of Radiology, Thomas Jefferson University Hospital, Philadelphia, PA, 19107, USA.
  • Majumdar S; Institute for Computational Health Sciences, University of California, San Francisco, CA, 94117, USA.
  • Ushizima D; Computational Research Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. dushizima@lbl.gov.
Sci Rep ; 11(1): 16075, 2021 08 09.
Article in English | MEDLINE | ID: covidwho-1349687
ABSTRACT
The new coronavirus unleashed a worldwide pandemic in early 2020, and a fatality rate several times that of the flu. As the number of infections soared, and capabilities for testing lagged behind, chest X-ray (CXR) imaging became more relevant in the early diagnosis and treatment planning for patients with suspected or confirmed COVID-19 infection. In a few weeks, proposed new methods for lung screening using deep learning rapidly appeared, while quality assurance discussions lagged behind. This paper proposes a set of protocols to validate deep learning algorithms, including our ROI Hide-and-Seek protocol, which emphasizes or hides key regions of interest from CXR data. Our protocol allows assessing the classification performance for anomaly detection and its correlation to radiological signatures, an important issue overlooked in several deep learning approaches proposed so far. By running a set of systematic tests over CXR representations using public image datasets, we demonstrate the weaknesses of current techniques and offer perspectives on the advantages and limitations of automated radiography analysis when using heterogeneous data sources.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Algorithms / Radiography, Thoracic / Deep Learning / COVID-19 Type of study: Diagnostic study / Observational study / Prognostic study / Systematic review/Meta Analysis Limits: Humans Language: English Journal: Sci Rep Year: 2021 Document Type: Article Affiliation country: S41598-021-95561-y

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Algorithms / Radiography, Thoracic / Deep Learning / COVID-19 Type of study: Diagnostic study / Observational study / Prognostic study / Systematic review/Meta Analysis Limits: Humans Language: English Journal: Sci Rep Year: 2021 Document Type: Article Affiliation country: S41598-021-95561-y