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Machine learning approach to dynamic risk modeling of mortality in COVID-19: a UK Biobank study.
Dabbah, Mohammad A; Reed, Angus B; Booth, Adam T C; Yassaee, Arrash; Despotovic, Aleksa; Klasmer, Benjamin; Binning, Emily; Aral, Mert; Plans, David; Morelli, Davide; Labrique, Alain B; Mohan, Diwakar.
  • Dabbah MA; Huma Therapeutics Limited, London, UK.
  • Reed AB; Huma Therapeutics Limited, London, UK.
  • Booth ATC; Huma Therapeutics Limited, London, UK.
  • Yassaee A; Huma Therapeutics Limited, London, UK.
  • Despotovic A; Centre for Paediatrics and Child Health, Faculty of Medicine, Imperial College London, London, UK.
  • Klasmer B; Huma Therapeutics Limited, London, UK.
  • Binning E; Faculty of Medicine, University of Belgrade, Belgrade, Serbia.
  • Aral M; Huma Therapeutics Limited, London, UK.
  • Plans D; Huma Therapeutics Limited, London, UK.
  • Morelli D; Huma Therapeutics Limited, London, UK.
  • Labrique AB; Huma Therapeutics Limited, London, UK. david.plans@huma.com.
  • Mohan D; University of Exeter, SITE, Exeter, UK. david.plans@huma.com.
Sci Rep ; 11(1): 16936, 2021 08 19.
Article in English | MEDLINE | ID: covidwho-1366827
ABSTRACT
The COVID-19 pandemic has created an urgent need for robust, scalable monitoring tools supporting stratification of high-risk patients. This research aims to develop and validate prediction models, using the UK Biobank, to estimate COVID-19 mortality risk in confirmed cases. From the 11,245 participants testing positive for COVID-19, we develop a data-driven random forest classification model with excellent performance (AUC 0.91), using baseline characteristics, pre-existing conditions, symptoms, and vital signs, such that the score could dynamically assess mortality risk with disease deterioration. We also identify several significant novel predictors of COVID-19 mortality with equivalent or greater predictive value than established high-risk comorbidities, such as detailed anthropometrics and prior acute kidney failure, urinary tract infection, and pneumonias. The model design and feature selection enables utility in outpatient settings. Possible applications include supporting individual-level risk profiling and monitoring disease progression across patients with COVID-19 at-scale, especially in hospital-at-home settings.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Models, Statistical / SARS-CoV-2 / COVID-19 Type of study: Cohort study / Observational study / Prognostic study / Randomized controlled trials Limits: Aged / Female / Humans / Male / Middle aged Country/Region as subject: Europa Language: English Journal: Sci Rep Year: 2021 Document Type: Article Affiliation country: S41598-021-95136-x

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Models, Statistical / SARS-CoV-2 / COVID-19 Type of study: Cohort study / Observational study / Prognostic study / Randomized controlled trials Limits: Aged / Female / Humans / Male / Middle aged Country/Region as subject: Europa Language: English Journal: Sci Rep Year: 2021 Document Type: Article Affiliation country: S41598-021-95136-x