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Predicting clinical outcomes in COVID-19 using radiomics on chest radiographs.
Varghese, Bino Abel; Shin, Heeseop; Desai, Bhushan; Gholamrezanezhad, Ali; Lei, Xiaomeng; Perkins, Melissa; Oberai, Assad; Nanda, Neha; Cen, Steven; Duddalwar, Vinay.
  • Varghese BA; Keck School of Medicine, University of Southern California, CA, USA.
  • Shin H; Keck School of Medicine, University of Southern California, CA, USA.
  • Desai B; Keck School of Medicine, University of Southern California, CA, USA.
  • Gholamrezanezhad A; Keck School of Medicine, University of Southern California, CA, USA.
  • Lei X; Keck School of Medicine, University of Southern California, CA, USA.
  • Perkins M; Keck School of Medicine, University of Southern California, CA, USA.
  • Oberai A; Viterbi School of Engineering, University of Southern California, Los Angeles, CA, USA.
  • Nanda N; Keck School of Medicine, University of Southern California, CA, USA.
  • Cen S; Keck School of Medicine, University of Southern California, CA, USA.
  • Duddalwar V; Keck School of Medicine, University of Southern California, CA, USA.
Br J Radiol ; 94(1126): 20210221, 2021 Oct 01.
Article in English | MEDLINE | ID: covidwho-1406740
ABSTRACT

OBJECTIVES:

For optimal utilization of healthcare resources, there is a critical need for early identification of COVID-19 patients at risk of poor prognosis as defined by the need for intensive unit care and mechanical ventilation. We tested the feasibility of chest X-ray (CXR)-based radiomics metrics to develop machine-learning algorithms for predicting patients with poor outcomes.

METHODS:

In this Institutional Review Board (IRB) approved, Health Insurance Portability and Accountability Act (HIPAA) compliant, retrospective study, we evaluated CXRs performed around the time of admission from 167 COVID-19 patients. Of the 167 patients, 68 (40.72%) required intensive care during their stay, 45 (26.95%) required intubation, and 25 (14.97%) died. Lung opacities were manually segmented using ITK-SNAP (open-source software). CaPTk (open-source software) was used to perform 2D radiomics analysis.

RESULTS:

Of all the algorithms considered, the AdaBoost classifier performed the best with AUC = 0.72 to predict the need for intubation, AUC = 0.71 to predict death, and AUC = 0.61 to predict the need for admission to the intensive care unit (ICU). AdaBoost had similar performance with ElasticNet in predicting the need for admission to ICU. Analysis of the key radiomic metrics that drive model prediction and performance showed the importance of first-order texture metrics compared to other radiomics panel metrics. Using a Venn-diagram analysis, two first-order texture metrics and one second-order texture metric that consistently played an important role in driving model performance in all three outcome predictions were identified.

CONCLUSIONS:

Considering the quantitative nature and reliability of radiomic metrics, they can be used prospectively as prognostic markers to individualize treatment plans for COVID-19 patients and also assist with healthcare resource management. ADVANCES IN KNOWLEDGE We report on the performance of CXR-based imaging metrics extracted from RT-PCR positive COVID-19 patients at admission to develop machine-learning algorithms for predicting the need for ICU, the need for intubation, and mortality, respectively.
Subject(s)

Full text: Available Collection: International databases Database: MEDLINE Main subject: Pneumonia, Viral / Radiography, Thoracic / Machine Learning / COVID-19 Type of study: Diagnostic study / Experimental Studies / Observational study / Prognostic study Limits: Adult / Aged / Female / Humans / Male / Middle aged Language: English Journal: Br J Radiol Year: 2021 Document Type: Article Affiliation country: Bjr.20210221

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Pneumonia, Viral / Radiography, Thoracic / Machine Learning / COVID-19 Type of study: Diagnostic study / Experimental Studies / Observational study / Prognostic study Limits: Adult / Aged / Female / Humans / Male / Middle aged Language: English Journal: Br J Radiol Year: 2021 Document Type: Article Affiliation country: Bjr.20210221