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A model integrating Killer Immunoglobulin-like Receptor (KIR) haplotypes for risk prediction of COVID-19 clinical disease severity.
Beksac, Meral; Akin, Hasan Yalim; Gencer-Oncul, Emine Begum; Yousefzadeh, Mahsa; Cengiz Seval, Guldane; Gulten, Ezgi; Akdemir Kalkan, Irem; Cinar, Gule; Memikoglu, Osman; Karaagaoglu, Ergun; Dalva, Klara.
  • Beksac M; Department of Hematology, Faculty of Medicine, Ankara University, Ankara, Turkey. beksac@medicine.ankara.edu.tr.
  • Akin HY; Department of Hematology, Faculty of Medicine, Ankara University, Ankara, Turkey.
  • Gencer-Oncul EB; Department of Hematology, Faculty of Medicine, Ankara University, Ankara, Turkey.
  • Yousefzadeh M; Department of Hematology, Faculty of Medicine, Ankara University, Ankara, Turkey.
  • Cengiz Seval G; Department of Hematology, Faculty of Medicine, Ankara University, Ankara, Turkey.
  • Gulten E; Department of Infectious Diseases and Clinical Microbiology, Faculty of Medicine, Ankara University, Ankara, Turkey.
  • Akdemir Kalkan I; Department of Infectious Diseases and Clinical Microbiology, Faculty of Medicine, Ankara University, Ankara, Turkey.
  • Cinar G; Department of Infectious Diseases and Clinical Microbiology, Faculty of Medicine, Ankara University, Ankara, Turkey.
  • Memikoglu O; Department of Infectious Diseases and Clinical Microbiology, Faculty of Medicine, Ankara University, Ankara, Turkey.
  • Karaagaoglu E; Department of Biostatistics, Faculty of Medicine, Hacettepe University, Ankara, Turkey.
  • Dalva K; Department of Hematology, Immunogenetics Laboratory, Faculty of Medicine, Ankara University, Ankara, Turkey.
Immunogenetics ; 73(6): 449-458, 2021 12.
Article in English | MEDLINE | ID: covidwho-1427233
ABSTRACT
Associations between inherited Killer Immunoglobulin-like Receptor (KIR) genotypes and the severity of multiple RNA virus infections have been reported. This prospective study was initiated to investigate if such an association exists for COVID-19. In this cohort study performed at Ankara University, 132 COVID-19 patients (56 asymptomatic, 51 mild-intermediate, and 25 patients with severe disease) were genotyped for KIR and ligands. Ankara University Donor Registry (n449) KIR data was used for comparison. Clinical parameters (age, gender, comorbidities, blood group antigens, inflammation biomarkers) and KIR genotypes across cohorts of asymptomatic, mild-intermediate, or severe disease were compared to construct a risk prediction model based on multivariate binary logistic regression analysis with backward elimination method. Age, blood group, number of comorbidities, CRP, D-dimer, and telomeric and centromeric KIR genotypes (tAA, tAB1, and cAB1) along with their cognate ligands were found to differ between cohorts. Two prediction models were constructed; both included age, number of comorbidities, and blood group. Inclusion of the KIR genotypes in the second prediction model exp (-3.52 + 1.56 age group - 2.74 blood group (type A vs others) + 1.26 number of comorbidities - 2.46 tAB1 with ligand + 3.17 tAA with ligand) increased the predictive performance with a 92.9% correct classification for asymptomatic and 76% for severe cases (AUC 0.93; P < 0.0001, 95% CI 0.88, 0.99). This novel risk model, consisting of KIR genotypes with their cognate ligands, and clinical parameters but excluding earlier published inflammation-related biomarkers allow for the prediction of the severity of COVID-19 infection prior to the onset of infection. This study is listed in the National COVID-19 clinical research studies database.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Severity of Illness Index / Genetic Predisposition to Disease / Receptors, KIR / COVID-19 Type of study: Cohort study / Diagnostic study / Observational study / Prognostic study Limits: Adult / Aged / Female / Humans / Male / Middle aged Country/Region as subject: Asia Language: English Journal: Immunogenetics Year: 2021 Document Type: Article Affiliation country: S00251-021-01227-4

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Severity of Illness Index / Genetic Predisposition to Disease / Receptors, KIR / COVID-19 Type of study: Cohort study / Diagnostic study / Observational study / Prognostic study Limits: Adult / Aged / Female / Humans / Male / Middle aged Country/Region as subject: Asia Language: English Journal: Immunogenetics Year: 2021 Document Type: Article Affiliation country: S00251-021-01227-4