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External validation of the QCovid risk prediction algorithm for risk of COVID-19 hospitalisation and mortality in adults: national validation cohort study in Scotland.
Simpson, Colin R; Robertson, Chris; Kerr, Steven; Shi, Ting; Vasileiou, Eleftheria; Moore, Emily; McCowan, Colin; Agrawal, Utkarsh; Docherty, Annemarie; Mulholland, Rachel; Murray, Josie; Ritchie, Lewis Duthie; McMenamin, Jim; Hippisley-Cox, Julia; Sheikh, Aziz.
  • Simpson CR; School of Health, Victoria University of Wellington, Wellington, New Zealand colin.simpson@vuw.ac.nz.
  • Robertson C; Usher Institute, The University of Edinburgh, Edinburgh, UK.
  • Kerr S; Department of Mathematics and Statistics, University of Strathclyde, Glasgow, UK.
  • Shi T; Usher Institute, The University of Edinburgh, Edinburgh, UK.
  • Vasileiou E; Usher Institute, The University of Edinburgh, Edinburgh, UK.
  • Moore E; Usher Institute, The University of Edinburgh, Edinburgh, UK.
  • McCowan C; Information Services Division, Public Health Scotland, Edinburgh, UK.
  • Agrawal U; School of Medicine, University of St Andrews, St Andrews, UK.
  • Docherty A; School of Medicine, University of St Andrews, St Andrews, UK.
  • Mulholland R; Usher Institute, The University of Edinburgh, Edinburgh, UK.
  • Murray J; Usher Institute, The University of Edinburgh, Edinburgh, UK.
  • Ritchie LD; Health Protection Scotland, Public Health Scotland, Glasgow, UK.
  • McMenamin J; Academic Primary Care, University of Aberdeen, Aberdeen, UK.
  • Hippisley-Cox J; Health Protection Scotland, Public Health Scotland, Glasgow, UK.
  • Sheikh A; Primary Care Health Sciences, University of Oxford, Oxford, UK.
Thorax ; 77(5): 497-504, 2022 05.
Article in English | MEDLINE | ID: covidwho-2319349
ABSTRACT

BACKGROUND:

The QCovid algorithm is a risk prediction tool that can be used to stratify individuals by risk of COVID-19 hospitalisation and mortality. Version 1 of the algorithm was trained using data covering 10.5 million patients in England in the period 24 January 2020 to 30 April 2020. We carried out an external validation of version 1 of the QCovid algorithm in Scotland.

METHODS:

We established a national COVID-19 data platform using individual level data for the population of Scotland (5.4 million residents). Primary care data were linked to reverse-transcription PCR (RT-PCR) virology testing, hospitalisation and mortality data. We assessed the performance of the QCovid algorithm in predicting COVID-19 hospitalisations and deaths in our dataset for two time periods matching the original study 1 March 2020 to 30 April 2020, and 1 May 2020 to 30 June 2020.

RESULTS:

Our dataset comprised 5 384 819 individuals, representing 99% of the estimated population (5 463 300) resident in Scotland in 2020. The algorithm showed good calibration in the first period, but systematic overestimation of risk in the second period, prior to temporal recalibration. Harrell's C for deaths in females and males in the first period was 0.95 (95% CI 0.94 to 0.95) and 0.93 (95% CI 0.92 to 0.93), respectively. Harrell's C for hospitalisations in females and males in the first period was 0.81 (95% CI 0.80 to 0.82) and 0.82 (95% CI 0.81 to 0.82), respectively.

CONCLUSIONS:

Version 1 of the QCovid algorithm showed high levels of discrimination in predicting the risk of COVID-19 hospitalisations and deaths in adults resident in Scotland for the original two time periods studied, but is likely to need ongoing recalibration prospectively.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: COVID-19 Type of study: Cohort study / Observational study / Prognostic study / Systematic review/Meta Analysis Limits: Adult / Female / Humans / Male Country/Region as subject: Europa Language: English Journal: Thorax Year: 2022 Document Type: Article Affiliation country: Thoraxjnl-2021-217580

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Full text: Available Collection: International databases Database: MEDLINE Main subject: COVID-19 Type of study: Cohort study / Observational study / Prognostic study / Systematic review/Meta Analysis Limits: Adult / Female / Humans / Male Country/Region as subject: Europa Language: English Journal: Thorax Year: 2022 Document Type: Article Affiliation country: Thoraxjnl-2021-217580