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Development of a multi-task learning V-Net for pulmonary lobar segmentation on CT and application to diseased lungs.
Boubnovski, M M; Chen, M; Linton-Reid, K; Posma, J M; Copley, S J; Aboagye, E O.
  • Boubnovski MM; Comprehensive Cancer Imaging Centre, Department of Surgery & Cancer, Imperial College London, Hammersmith Hospital, London W12 0NN, UK.
  • Chen M; Comprehensive Cancer Imaging Centre, Department of Surgery & Cancer, Imperial College London, Hammersmith Hospital, London W12 0NN, UK; Department of Radiology, Hammersmith Hospital, Imperial College Healthcare NHS Trust, London W12 0HS, UK.
  • Linton-Reid K; Comprehensive Cancer Imaging Centre, Department of Surgery & Cancer, Imperial College London, Hammersmith Hospital, London W12 0NN, UK.
  • Posma JM; Department of Metabolism, Digestion and Reproduction, South Kensington, London SW7 2AZ, UK.
  • Copley SJ; Comprehensive Cancer Imaging Centre, Department of Surgery & Cancer, Imperial College London, Hammersmith Hospital, London W12 0NN, UK; Department of Radiology, Hammersmith Hospital, Imperial College Healthcare NHS Trust, London W12 0HS, UK.
  • Aboagye EO; Comprehensive Cancer Imaging Centre, Department of Surgery & Cancer, Imperial College London, Hammersmith Hospital, London W12 0NN, UK. Electronic address: eric.aboagye@imperial.ac.uk.
Clin Radiol ; 77(8): e620-e627, 2022 08.
Article in English | MEDLINE | ID: covidwho-1867031
ABSTRACT

AIM:

To develop a multi-task learning (MTL) V-Net for pulmonary lobar segmentation on computed tomography (CT) and application to diseased lungs. MATERIALS AND

METHODS:

The described methodology utilises tracheobronchial tree information to enhance segmentation accuracy through the algorithm's spatial familiarity to define lobar extent more accurately. The method undertakes parallel segmentation of lobes and auxiliary tissues simultaneously by employing MTL in conjunction with V-Net-attention, a popular convolutional neural network in the imaging realm. Its performance was validated by an external dataset of patients with four distinct lung conditions severe lung cancer, COVID-19 pneumonitis, collapsed lungs, and chronic obstructive pulmonary disease (COPD), even though the training data included none of these cases.

RESULTS:

The following Dice scores were achieved on a per-segment basis normal lungs 0.97, COPD 0.94, lung cancer 0.94, COVID-19 pneumonitis 0.94, and collapsed lung 0.92, all at p<0.05.

CONCLUSION:

Despite severe abnormalities, the model provided good performance at segmenting lobes, demonstrating the benefit of tissue learning. The proposed model is poised for adoption in the clinical setting as a robust tool for radiologists and researchers to define the lobar distribution of lung diseases and aid in disease treatment planning.
Subject(s)

Full text: Available Collection: International databases Database: MEDLINE Main subject: Pulmonary Disease, Chronic Obstructive / COVID-19 / Lung Neoplasms Type of study: Prognostic study Limits: Humans Language: English Journal: Clin Radiol Year: 2022 Document Type: Article Affiliation country: J.crad.2022.04.012

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Pulmonary Disease, Chronic Obstructive / COVID-19 / Lung Neoplasms Type of study: Prognostic study Limits: Humans Language: English Journal: Clin Radiol Year: 2022 Document Type: Article Affiliation country: J.crad.2022.04.012