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International comparisons of laboratory values from the 4CE collaborative to predict COVID-19 mortality.
Weber, Griffin M; Hong, Chuan; Xia, Zongqi; Palmer, Nathan P; Avillach, Paul; L'Yi, Sehi; Keller, Mark S; Murphy, Shawn N; Gutiérrez-Sacristán, Alba; Bonzel, Clara-Lea; Serret-Larmande, Arnaud; Neuraz, Antoine; Omenn, Gilbert S; Visweswaran, Shyam; Klann, Jeffrey G; South, Andrew M; Loh, Ne Hooi Will; Cannataro, Mario; Beaulieu-Jones, Brett K; Bellazzi, Riccardo; Agapito, Giuseppe; Alessiani, Mario; Aronow, Bruce J; Bell, Douglas S; Benoit, Vincent; Bourgeois, Florence T; Chiovato, Luca; Cho, Kelly; Dagliati, Arianna; DuVall, Scott L; Barrio, Noelia García; Hanauer, David A; Ho, Yuk-Lam; Holmes, John H; Issitt, Richard W; Liu, Molei; Luo, Yuan; Lynch, Kristine E; Maidlow, Sarah E; Malovini, Alberto; Mandl, Kenneth D; Mao, Chengsheng; Matheny, Michael E; Moore, Jason H; Morris, Jeffrey S; Morris, Michele; Mowery, Danielle L; Ngiam, Kee Yuan; Patel, Lav P; Pedrera-Jimenez, Miguel.
  • Weber GM; Department of Biomedical Informatics, Harvard Medical School, Boston, USA.
  • Hong C; Department of Biomedical Informatics, Harvard Medical School, Boston, USA.
  • Xia Z; Department of Biostatistics and Bioinformatics, Duke University, Durham, USA.
  • Palmer NP; Department of Neurology, University of Pittsburgh, Pittsburgh, USA.
  • Avillach P; Department of Biomedical Informatics, Harvard Medical School, Boston, USA.
  • L'Yi S; Department of Biomedical Informatics, Harvard Medical School, Boston, USA.
  • Keller MS; Department of Biomedical Informatics, Harvard Medical School, Boston, USA.
  • Murphy SN; Department of Biomedical Informatics, Harvard Medical School, Boston, USA.
  • Gutiérrez-Sacristán A; Department of Neurology, Massachusetts General Hospital, Boston, USA.
  • Bonzel CL; Department of Biomedical Informatics, Harvard Medical School, Boston, USA.
  • Serret-Larmande A; Department of Biomedical Informatics, Harvard Medical School, Boston, USA.
  • Neuraz A; Department of biomedical informatics, Hôpital Européen Georges Pompidou, Assistance Publique - Hôpitaux de Paris, Paris, France.
  • Omenn GS; Department of biomedical informatics, Hôpital Necker-Enfants Malade, Assistance Publique Hôpitaux de Paris (APHP), University of Paris, Paris, France.
  • Visweswaran S; Department of Computational Medicine & Bioinformatics, Internal Medicine, Human Genetics, and School of Public Health, University of Michigan, Ann Arbor, USA.
  • Klann JG; Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, USA.
  • South AM; Department of Medicine, Massachusetts General Hospital, Boston, USA.
  • Loh NHW; Department of Pediatrics-Section of Nephrology, Brenner Children's Hospital, Wake Forest School of Medicine, Winston Salem, USA.
  • Cannataro M; Department of Anaesthesia, National University Health System, Singapore, Singapore, Singapore.
  • Beaulieu-Jones BK; Department of Medical and Surgical Sciences, Data Analytics Research Center, University Magna Graecia of Catanzaro, Italy, Catanzaro, Italy.
  • Bellazzi R; Department of Biomedical Informatics, Harvard Medical School, Boston, USA.
  • Agapito G; Department of Electrical, Computer and Biomedical Engineering, University of Pavia, Italy, Pavia, Italy.
  • Alessiani M; Department of Legal, Economic and Social Sciences, University Magna Graecia of Catanzaro, Italy, Catanzaro, Italy.
  • Aronow BJ; Department of Surgery, ASST Pavia, Lombardia Region Health System, Pavia, Italy.
  • Bell DS; Departments of Biomedical Informatics, Pediatrics, Cincinnati Children's Hospital Medical Center, University of Cincinnati, Cincinnati, USA.
  • Benoit V; Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, USA.
  • Bourgeois FT; IT department, Innovation & Data, APHP Greater Paris University Hospital, Paris, France.
  • Chiovato L; Department of Pediatrics, Harvard Medical School, Boston, USA.
  • Cho K; Unit of Internal Medicine and Endocrinology, Istituti Clinici Scientifici Maugeri SpA SB IRCCS, Pavia, Italy.
  • Dagliati A; Massachusetts Veterans Epidemiology Research and Information Center (MAVERIC), VA Boston Healthcare System, Boston, USA.
  • DuVall SL; Department of Electrical Computer and Biomedical Engineering, University of Pavia, Italy, Pavia, Italy.
  • Barrio NG; VA Informatics and Computing Infrastructure, VA Salt Lake City Health Care System, Salt Lake City, USA.
  • Hanauer DA; Health Informatics, Hospital Universitario 12 de Octubre, Madrid, Spain.
  • Ho YL; Department of Learning Health Sciences, University of Michigan, Ann Arbor, USA.
  • Holmes JH; Massachusetts Veterans Epidemiology Research and Information Center (MAVERIC), VA Boston Healthcare System, Boston, USA.
  • Issitt RW; Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, USA.
  • Liu M; Institute for Biomedical Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, USA.
  • Luo Y; Digital Research, Informatics and Virtual Environments (DRIVE), Great Ormond Street Hospital for Children, UK, London, UK.
  • Lynch KE; Department of Biostatistics, Harvard School of Public Health, Boston, USA.
  • Maidlow SE; Department of Preventive Medicine, Northwestern University, Chicago, USA.
  • Malovini A; VA Informatics and Computing Infrastructure, VA Salt Lake City Health Care System, Salt Lake City, USA.
  • Mandl KD; Michigan Institute for Clinical and Health Research, University of Michigan, Ann Arbor, USA.
  • Mao C; Laboratory of Informatics and Systems Engineering for Clinical Research, Istituti Clinici Scientifici Maugeri SpA SB IRCCS, Pavia, Italy.
  • Matheny ME; Computational Health Informatics Program, Boston Children's Hospital, Boston, USA.
  • Moore JH; Department of Preventive Medicine, Northwestern University, Chicago, USA.
  • Morris JS; VA Informatics and Computing Infrastructure, Tennessee Valley Healthcare System Veterans Affairs Medical Center, Nashville, USA.
  • Morris M; Institute for Biomedical Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, USA.
  • Mowery DL; Department of Biostatistics, Epidemiology, and Biostatistics, University of Pennysylvania Perelman School of Medicine, Philadelphia, USA.
  • Ngiam KY; Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, USA.
  • Patel LP; Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania Perelman School of Medicine, Philadelphia, USA.
  • Pedrera-Jimenez M; Department of Biomedical informatics, WiSDM, National University Health Systems Singapore, Singapore, Singapore.
NPJ Digit Med ; 5(1): 74, 2022 Jun 13.
Article in English | MEDLINE | ID: covidwho-1890276
ABSTRACT
Given the growing number of prediction algorithms developed to predict COVID-19 mortality, we evaluated the transportability of a mortality prediction algorithm using a multi-national network of healthcare systems. We predicted COVID-19 mortality using baseline commonly measured laboratory values and standard demographic and clinical covariates across healthcare systems, countries, and continents. Specifically, we trained a Cox regression model with nine measured laboratory test values, standard demographics at admission, and comorbidity burden pre-admission. These models were compared at site, country, and continent level. Of the 39,969 hospitalized patients with COVID-19 (68.6% male), 5717 (14.3%) died. In the Cox model, age, albumin, AST, creatine, CRP, and white blood cell count are most predictive of mortality. The baseline covariates are more predictive of mortality during the early days of COVID-19 hospitalization. Models trained at healthcare systems with larger cohort size largely retain good transportability performance when porting to different sites. The combination of routine laboratory test values at admission along with basic demographic features can predict mortality in patients hospitalized with COVID-19. Importantly, this potentially deployable model differs from prior work by demonstrating not only consistent performance but also reliable transportability across healthcare systems in the US and Europe, highlighting the generalizability of this model and the overall approach.

Full text: Available Collection: International databases Database: MEDLINE Type of study: Cohort study / Experimental Studies / Observational study / Prognostic study Language: English Journal: NPJ Digit Med Year: 2022 Document Type: Article Affiliation country: S41746-022-00601-0

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Full text: Available Collection: International databases Database: MEDLINE Type of study: Cohort study / Experimental Studies / Observational study / Prognostic study Language: English Journal: NPJ Digit Med Year: 2022 Document Type: Article Affiliation country: S41746-022-00601-0