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Quantifying the importance and location of SARS-CoV-2 transmission events in large metropolitan areas.
Aleta, Alberto; Martín-Corral, David; Bakker, Michiel A; Pastore Y Piontti, Ana; Ajelli, Marco; Litvinova, Maria; Chinazzi, Matteo; Dean, Natalie E; Halloran, M Elizabeth; Longini, Ira M; Pentland, Alex; Vespignani, Alessandro; Moreno, Yamir; Moro, Esteban.
  • Aleta A; ISI Foundation, 10126 Turin, Italy.
  • Martín-Corral D; Departamento de Matemáticas, Universidad Carlos III de Madrid, 28911 Leganés, Spain.
  • Bakker MA; Grupo Interdisciplinar de Sistemas Complejos, Universidad Carlos III de Madrid, 28911 Leganés, Spain.
  • Pastore Y Piontti A; Zensei Technologies S.L., 28010 Madrid, Spain.
  • Ajelli M; Connection Science, Institute for Data Science and Society, Massachusetts Institute of Technology, Cambridge, MA 02139.
  • Litvinova M; Laboratory for the Modeling of Biological and Socio-technical Systems, Northeastern University, Boston, MA 02115.
  • Chinazzi M; Laboratory for the Modeling of Biological and Socio-technical Systems, Northeastern University, Boston, MA 02115.
  • Dean NE; Laboratory for Computational Epidemiology and Public Health, Department of Epidemiology and Biostatistics, Indiana University School of Public Health, Bloomington, IN 47405.
  • Halloran ME; Laboratory for Computational Epidemiology and Public Health, Department of Epidemiology and Biostatistics, Indiana University School of Public Health, Bloomington, IN 47405.
  • Longini IM; Laboratory for the Modeling of Biological and Socio-technical Systems, Northeastern University, Boston, MA 02115.
  • Pentland A; Department of Biostatistics, College of Public Health and Health Professions, University of Florida, Gainesville, FL 32611.
  • Vespignani A; Biostatistics, Bioinformatics, and Epidemiology Program, Vaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109.
  • Moreno Y; Department of Biostatistics, University of Washington, Seattle, WA 98195.
  • Moro E; Department of Biostatistics, College of Public Health and Health Professions, University of Florida, Gainesville, FL 32611.
Proc Natl Acad Sci U S A ; 119(26): e2112182119, 2022 06 28.
Article in English | MEDLINE | ID: covidwho-1890404
ABSTRACT
Detailed characterization of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission across different settings can help design less disruptive interventions. We used real-time, privacy-enhanced mobility data in the New York City, NY and Seattle, WA metropolitan areas to build a detailed agent-based model of SARS-CoV-2 infection to estimate the where, when, and magnitude of transmission events during the pandemic's first wave. We estimate that only 18% of individuals produce most infections (80%), with about 10% of events that can be considered superspreading events (SSEs). Although mass gatherings present an important risk for SSEs, we estimate that the bulk of transmission occurred in smaller events in settings like workplaces, grocery stores, or food venues. The places most important for transmission change during the pandemic and are different across cities, signaling the large underlying behavioral component underneath them. Our modeling complements case studies and epidemiological data and indicates that real-time tracking of transmission events could help evaluate and define targeted mitigation policies.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Contact Tracing / SARS-CoV-2 / COVID-19 Type of study: Experimental Studies / Observational study / Prognostic study Limits: Humans Country/Region as subject: North America Language: English Journal: Proc Natl Acad Sci U S A Year: 2022 Document Type: Article Affiliation country: Pnas.2112182119

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Contact Tracing / SARS-CoV-2 / COVID-19 Type of study: Experimental Studies / Observational study / Prognostic study Limits: Humans Country/Region as subject: North America Language: English Journal: Proc Natl Acad Sci U S A Year: 2022 Document Type: Article Affiliation country: Pnas.2112182119