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COVLIAS 1.0Lesion vs. MedSeg: An Artificial Intelligence Framework for Automated Lesion Segmentation in COVID-19 Lung Computed Tomography Scans.
Suri, Jasjit S; Agarwal, Sushant; Chabert, Gian Luca; Carriero, Alessandro; Paschè, Alessio; Danna, Pietro S C; Saba, Luca; Mehmedovic, Armin; Faa, Gavino; Singh, Inder M; Turk, Monika; Chadha, Paramjit S; Johri, Amer M; Khanna, Narendra N; Mavrogeni, Sophie; Laird, John R; Pareek, Gyan; Miner, Martin; Sobel, David W; Balestrieri, Antonella; Sfikakis, Petros P; Tsoulfas, George; Protogerou, Athanasios D; Misra, Durga Prasanna; Agarwal, Vikas; Kitas, George D; Teji, Jagjit S; Al-Maini, Mustafa; Dhanjil, Surinder K; Nicolaides, Andrew; Sharma, Aditya; Rathore, Vijay; Fatemi, Mostafa; Alizad, Azra; Krishnan, Pudukode R; Nagy, Ferenc; Ruzsa, Zoltan; Fouda, Mostafa M; Naidu, Subbaram; Viskovic, Klaudija; Kalra, Manudeep K.
  • Suri JS; Stroke Diagnostic and Monitoring Division, AtheroPoint™, Roseville, CA 95661, USA.
  • Agarwal S; Advanced Knowledge Engineering Centre, GBTI, Roseville, CA 95661, USA.
  • Chabert GL; Advanced Knowledge Engineering Centre, GBTI, Roseville, CA 95661, USA.
  • Carriero A; Department of Computer Science Engineering, PSIT, Kanpur 209305, India.
  • Paschè A; Department of Radiology, Azienda Ospedaliero Universitaria (A.O.U.), 09124 Cagliari, Italy.
  • Danna PSC; Department of Radiology, "Maggiore della Carità" Hospital, University of Piemonte Orientale (UPO), Via Solaroli 17, 28100 Novara, Italy.
  • Saba L; Department of Radiology, Azienda Ospedaliero Universitaria (A.O.U.), 09124 Cagliari, Italy.
  • Mehmedovic A; Department of Radiology, Azienda Ospedaliero Universitaria (A.O.U.), 09124 Cagliari, Italy.
  • Faa G; Department of Radiology, Azienda Ospedaliero Universitaria (A.O.U.), 09124 Cagliari, Italy.
  • Singh IM; University Hospital for Infectious Diseases, 10000 Zagreb, Croatia.
  • Turk M; Department of Pathology, Azienda Ospedaliero Universitaria (A.O.U.), 09124 Cagliari, Italy.
  • Chadha PS; Stroke Diagnostic and Monitoring Division, AtheroPoint™, Roseville, CA 95661, USA.
  • Johri AM; The Hanse-Wissenschaftskolleg Institute for Advanced Study, 27753 Delmenhorst, Germany.
  • Khanna NN; Stroke Diagnostic and Monitoring Division, AtheroPoint™, Roseville, CA 95661, USA.
  • Mavrogeni S; Department of Medicine, Division of Cardiology, Queen's University, Kingston, ON K7L 3N6, Canada.
  • Laird JR; Department of Cardiology, Indraprastha APOLLO Hospitals, New Delhi 110076, India.
  • Pareek G; Cardiology Clinic, Onassis Cardiac Surgery Center, 17674 Athens, Greece.
  • Miner M; Heart and Vascular Institute, Adventist Health St. Helena, St Helena, CA 94574, USA.
  • Sobel DW; Minimally Invasive Urology Institute, Brown University, Providence, RI 02912, USA.
  • Balestrieri A; Men's Health Center, Miriam Hospital, Providence, RI 02906, USA.
  • Sfikakis PP; Minimally Invasive Urology Institute, Brown University, Providence, RI 02912, USA.
  • Tsoulfas G; Department of Radiology, Azienda Ospedaliero Universitaria (A.O.U.), 09124 Cagliari, Italy.
  • Protogerou AD; Rheumatology Unit, National Kapodistrian University of Athens, 15772 Athens, Greece.
  • Misra DP; Department of Surgery, Aristoteleion University of Thessaloniki, 54124 Thessaloniki, Greece.
  • Agarwal V; Cardiovascular Prevention and Research Unit, Department of Pathophysiology, National & Kapodistrian University of Athens, 15772 Athens, Greece.
  • Kitas GD; Department of Immunology, Sanjay Gandhi Postgraduate Institute of Medical Sciences, Lucknow 226014, India.
  • Teji JS; Department of Immunology, Sanjay Gandhi Postgraduate Institute of Medical Sciences, Lucknow 226014, India.
  • Al-Maini M; Academic Affairs, Dudley Group NHS Foundation Trust, Dudley DY1 2HQ, UK.
  • Dhanjil SK; Arthritis Research UK Epidemiology Unit, Manchester University, Manchester M13 9PL, UK.
  • Nicolaides A; Ann and Robert H. Lurie Children's Hospital of Chicago, Chicago, IL 60611, USA.
  • Sharma A; Allergy, Clinical Immunology and Rheumatology Institute, Toronto, ON L4Z 4C4, Canada.
  • Rathore V; AtheroPoint LLC, Roseville, CA 95661, USA.
  • Fatemi M; Vascular Screening and Diagnostic Centre, University of Nicosia Medical School, Nicosia 2408, Cyprus.
  • Alizad A; Division of Cardiovascular Medicine, University of Virginia, Charlottesville, VA 22908, USA.
  • Krishnan PR; AtheroPoint LLC, Roseville, CA 95661, USA.
  • Nagy F; Department of Physiology and Biomedical Engineering, Mayo Clinic College of Medicine and Science, Rochester, MN 55905, USA.
  • Ruzsa Z; Department of Radiology, Mayo Clinic College of Medicine and Science, Rochester, MN 55905, USA.
  • Fouda MM; Neurology Department, Fortis Hospital, Bangalore 560076, India.
  • Naidu S; Internal Medicine Department, University of Szeged, 6725 Szeged, Hungary.
  • Viskovic K; Invasive Cardiology Division, University of Szeged, 6725 Szeged, Hungary.
  • Kalra MK; Department of Electrical and Computer Engineering, Idaho State University, Pocatello, ID 83209, USA.
Diagnostics (Basel) ; 12(5)2022 May 21.
Article in English | MEDLINE | ID: covidwho-1953134
ABSTRACT

BACKGROUND:

COVID-19 is a disease with multiple variants, and is quickly spreading throughout the world. It is crucial to identify patients who are suspected of having COVID-19 early, because the vaccine is not readily available in certain parts of the world.

METHODOLOGY:

Lung computed tomography (CT) imaging can be used to diagnose COVID-19 as an alternative to the RT-PCR test in some cases. The occurrence of ground-glass opacities in the lung region is a characteristic of COVID-19 in chest CT scans, and these are daunting to locate and segment manually. The proposed study consists of a combination of solo deep learning (DL) and hybrid DL (HDL) models to tackle the lesion location and segmentation more quickly. One DL and four HDL models-namely, PSPNet, VGG-SegNet, ResNet-SegNet, VGG-UNet, and ResNet-UNet-were trained by an expert radiologist. The training scheme adopted a fivefold cross-validation strategy on a cohort of 3000 images selected from a set of 40 COVID-19-positive individuals.

RESULTS:

The proposed variability study uses tracings from two trained radiologists as part of the validation. Five artificial intelligence (AI) models were benchmarked against MedSeg. The best AI model, ResNet-UNet, was superior to MedSeg by 9% and 15% for Dice and Jaccard, respectively, when compared against MD 1, and by 4% and 8%, respectively, when compared against MD 2. Statistical tests-namely, the Mann-Whitney test, paired t-test, and Wilcoxon test-demonstrated its stability and reliability, with p < 0.0001. The online system for each slice was <1 s.

CONCLUSIONS:

The AI models reliably located and segmented COVID-19 lesions in CT scans. The COVLIAS 1.0Lesion lesion locator passed the intervariability test.
Keywords

Full text: Available Collection: International databases Database: MEDLINE Type of study: Cohort study / Observational study / Prognostic study / Randomized controlled trials Topics: Vaccines / Variants Language: English Year: 2022 Document Type: Article Affiliation country: Diagnostics12051283

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Full text: Available Collection: International databases Database: MEDLINE Type of study: Cohort study / Observational study / Prognostic study / Randomized controlled trials Topics: Vaccines / Variants Language: English Year: 2022 Document Type: Article Affiliation country: Diagnostics12051283