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Visualization for epidemiological modelling: challenges, solutions, reflections and recommendations.
Dykes, Jason; Abdul-Rahman, Alfie; Archambault, Daniel; Bach, Benjamin; Borgo, Rita; Chen, Min; Enright, Jessica; Fang, Hui; Firat, Elif E; Freeman, Euan; Gönen, Tuna; Harris, Claire; Jianu, Radu; John, Nigel W; Khan, Saiful; Lahiff, Andrew; Laramee, Robert S; Matthews, Louise; Mohr, Sibylle; Nguyen, Phong H; Rahat, Alma A M; Reeve, Richard; Ritsos, Panagiotis D; Roberts, Jonathan C; Slingsby, Aidan; Swallow, Ben; Torsney-Weir, Thomas; Turkay, Cagatay; Turner, Robert; Vidal, Franck P; Wang, Qiru; Wood, Jo; Xu, Kai.
  • Dykes J; City, University of London, London, UK.
  • Abdul-Rahman A; King's College London, London, UK.
  • Archambault D; Swansea University, Swansea, UK.
  • Bach B; University of Edinburgh, Edinburgh, UK.
  • Borgo R; King's College London, London, UK.
  • Chen M; University of Oxford, Oxford, UK.
  • Enright J; University of Glasgow, Glasgow, UK.
  • Fang H; Loughborough University, Loughborough, UK.
  • Firat EE; University of Nottingham, Nottingham, UK.
  • Freeman E; University of Glasgow, Glasgow, UK.
  • Gönen T; University of Oxford, Oxford, UK.
  • Harris C; Biomathematics and Statistics Scotland, Edinburgh, UK.
  • Jianu R; City, University of London, London, UK.
  • John NW; University of Chester, Chester, UK.
  • Khan S; University of Oxford, Oxford, UK.
  • Lahiff A; UKAEA, Abingdon, UK.
  • Laramee RS; University of Nottingham, Nottingham, UK.
  • Matthews L; University of Glasgow, Glasgow, UK.
  • Mohr S; University of Glasgow, Glasgow, UK.
  • Nguyen PH; University of Oxford, Oxford, UK.
  • Rahat AAM; Swansea University, Swansea, UK.
  • Reeve R; University of Glasgow, Glasgow, UK.
  • Ritsos PD; Bangor University, Bangor, UK.
  • Roberts JC; Bangor University, Bangor, UK.
  • Slingsby A; City, University of London, London, UK.
  • Swallow B; University of Glasgow, Glasgow, UK.
  • Torsney-Weir T; Swansea University, Swansea, UK.
  • Turkay C; University of Warwick, Coventry, UK.
  • Turner R; University of Sheffield, Sheffield, UK.
  • Vidal FP; Bangor University, Bangor, UK.
  • Wang Q; University of Nottingham, Nottingham, UK.
  • Wood J; City, University of London, London, UK.
  • Xu K; Middlesex University, London, UK.
Philos Trans A Math Phys Eng Sci ; 380(2233): 20210299, 2022 Oct 03.
Article in English | MEDLINE | ID: covidwho-1992457
ABSTRACT
We report on an ongoing collaboration between epidemiological modellers and visualization researchers by documenting and reflecting upon knowledge constructs-a series of ideas, approaches and methods taken from existing visualization research and practice-deployed and developed to support modelling of the COVID-19 pandemic. Structured independent commentary on these efforts is synthesized through iterative reflection to develop evidence of the effectiveness and value of visualization in this context; open problems upon which the research communities may focus; guidance for future activity of this type and recommendations to safeguard the achievements and promote, advance, secure and prepare for future collaborations of this kind. In describing and comparing a series of related projects that were undertaken in unprecedented conditions, our hope is that this unique report, and its rich interactive supplementary materials, will guide the scientific community in embracing visualization in its observation, analysis and modelling of data as well as in disseminating findings. Equally we hope to encourage the visualization community to engage with impactful science in addressing its emerging data challenges. If we are successful, this showcase of activity may stimulate mutually beneficial engagement between communities with complementary expertise to address problems of significance in epidemiology and beyond. See https//ramp-vis.github.io/RAMPVIS-PhilTransA-Supplement/. This article is part of the theme issue 'Technical challenges of modelling real-life epidemics and examples of overcoming these'.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Pandemics / COVID-19 Type of study: Observational study / Prognostic study Limits: Humans Language: English Journal: Philos Trans A Math Phys Eng Sci Journal subject: Biophysics / Biomedical Engineering Year: 2022 Document Type: Article Affiliation country: Rsta.2021.0299

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Pandemics / COVID-19 Type of study: Observational study / Prognostic study Limits: Humans Language: English Journal: Philos Trans A Math Phys Eng Sci Journal subject: Biophysics / Biomedical Engineering Year: 2022 Document Type: Article Affiliation country: Rsta.2021.0299