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HADCNet: Automatic segmentation of COVID-19 infection based on a hybrid attention dense connected network with dilated convolution.
Chen, Ying; Zhou, Taohui; Chen, Yi; Feng, Longfeng; Zheng, Cheng; Liu, Lan; Hu, Liping; Pan, Bujian.
  • Chen Y; School of Software, Nanchang Hangkong University, Nanchang, 330063, PR China. Electronic address: c_y2008@nchu.edu.cn.
  • Zhou T; School of Software, Nanchang Hangkong University, Nanchang, 330063, PR China. Electronic address: 3156574420@qq.com.
  • Chen Y; Department of Computer Science and Artificial Intelligence, Wenzhou University, Wenzhou, 325035, PR China. Electronic address: kenyoncy2016@gmail.com.
  • Feng L; School of Software, Nanchang Hangkong University, Nanchang, 330063, PR China. Electronic address: flf1998@qq.com.
  • Zheng C; School of Software, Nanchang Hangkong University, Nanchang, 330063, PR China. Electronic address: ZasonCheng@163.com.
  • Liu L; Department of Radiology, Jiangxi Cancer Hospital, Nanchang, 330029, PR China. Electronic address: liulan6688@163.com.
  • Hu L; Department of Radiology, Jiangxi Cancer Hospital, Nanchang, 330029, PR China. Electronic address: 158562940@qq.com.
  • Pan B; Department of Hepatobiliary Surgery, Wenzhou Central Hospital, The Dingli Clinical Institute of Wenzhou Medical University, Wenzhou, Zhejiang, 325000, PR China. Electronic address: panbujian@126.com.
Comput Biol Med ; 149: 105981, 2022 10.
Article in English | MEDLINE | ID: covidwho-1996099
ABSTRACT
the automatic segmentation of lung infections in CT slices provides a rapid and effective strategy for diagnosing, treating, and assessing COVID-19 cases. However, the segmentation of the infected areas presents several difficulties, including high intraclass variability and interclass similarity among infected areas, as well as blurred edges and low contrast. Therefore, we propose HADCNet, a deep learning framework that segments lung infections based on a dual hybrid attention strategy. HADCNet uses an encoder hybrid attention module to integrate feature information at different scales across the peer hierarchy to refine the feature map. Furthermore, a decoder hybrid attention module uses an improved skip connection to embed the semantic information of higher-level features into lower-level features by integrating multi-scale contextual structures and assigning the spatial information of lower-level features to higher-level features, thereby capturing the contextual dependencies of lesion features across levels and refining the semantic structure, which reduces the semantic gap between feature maps at different levels and improves the model segmentation performance. We conducted fivefold cross-validations of our model on four publicly available datasets, with final mean Dice scores of 0.792, 0.796, 0.785, and 0.723. These results show that the proposed model outperforms popular state-of-the-art semantic segmentation methods and indicate its potential use in the diagnosis and treatment of COVID-19.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Deep Learning / COVID-19 Type of study: Observational study / Prognostic study / Randomized controlled trials Limits: Humans Language: English Journal: Comput Biol Med Year: 2022 Document Type: Article

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Deep Learning / COVID-19 Type of study: Observational study / Prognostic study / Randomized controlled trials Limits: Humans Language: English Journal: Comput Biol Med Year: 2022 Document Type: Article