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Predicting the potential for zoonotic transmission and host associations for novel viruses.
Pandit, P S; Anthony, S J; Goldstein, T; Olival, K J; Doyle, M M; Gardner, N R; Bird, B; Smith, W A; Wolking, D; Gilardi, K; Monagin, C; Kelly, T; Uhart, M; Epstein, J H; Machalaba, C; Rostal, M K; Dawson, P; Hagan, E; Sullivan, A; Li, H; Chmura, A A; Latinne, A; Lange, C; O'Rourke, T; Olson, S H; Keatts, L; Mendoza, A P; Perez, A; de Paula, C Dejuste; Zimmerman, D; Valitutto, M; LeBreton, M; McIver, D; Islam, A; Duong, V; Mouiche, M; Shi, Z; Mulembakani, P; Kumakamba, C; Ali, M; Kebede, N; Tamoufe, U; Bel-Nono, S; Camara, A; Pamungkas, J; Coulibaly, K; Abu-Basha, E; Kamau, J; Silithammavong, S; Desmond, J.
  • Pandit PS; One Health Institute, School of Veterinary Medicine, University of California, Davis, Davis, CA, 95616, USA. pspandit@ucdavis.edu.
  • Anthony SJ; Center for Infection and Immunity, Columbia University, New York, NY, 10032, USA.
  • Goldstein T; One Health Institute, School of Veterinary Medicine, University of California, Davis, Davis, CA, 95616, USA.
  • Olival KJ; EcoHealth Alliance, 520 Eighth Avenue, New York, NY, 10018, USA.
  • Doyle MM; One Health Institute, School of Veterinary Medicine, University of California, Davis, Davis, CA, 95616, USA.
  • Gardner NR; One Health Institute, School of Veterinary Medicine, University of California, Davis, Davis, CA, 95616, USA.
  • Bird B; One Health Institute, School of Veterinary Medicine, University of California, Davis, Davis, CA, 95616, USA.
  • Smith WA; One Health Institute, School of Veterinary Medicine, University of California, Davis, Davis, CA, 95616, USA.
  • Wolking D; One Health Institute, School of Veterinary Medicine, University of California, Davis, Davis, CA, 95616, USA.
  • Gilardi K; One Health Institute, School of Veterinary Medicine, University of California, Davis, Davis, CA, 95616, USA.
  • Monagin C; One Health Institute, School of Veterinary Medicine, University of California, Davis, Davis, CA, 95616, USA.
  • Kelly T; One Health Institute, School of Veterinary Medicine, University of California, Davis, Davis, CA, 95616, USA.
  • Uhart M; One Health Institute, School of Veterinary Medicine, University of California, Davis, Davis, CA, 95616, USA.
  • Epstein JH; EcoHealth Alliance, 520 Eighth Avenue, New York, NY, 10018, USA.
  • Machalaba C; EcoHealth Alliance, 520 Eighth Avenue, New York, NY, 10018, USA.
  • Rostal MK; EcoHealth Alliance, 520 Eighth Avenue, New York, NY, 10018, USA.
  • Dawson P; EcoHealth Alliance, 520 Eighth Avenue, New York, NY, 10018, USA.
  • Hagan E; EcoHealth Alliance, 520 Eighth Avenue, New York, NY, 10018, USA.
  • Sullivan A; EcoHealth Alliance, 520 Eighth Avenue, New York, NY, 10018, USA.
  • Li H; EcoHealth Alliance, 520 Eighth Avenue, New York, NY, 10018, USA.
  • Chmura AA; EcoHealth Alliance, 520 Eighth Avenue, New York, NY, 10018, USA.
  • Latinne A; EcoHealth Alliance, 520 Eighth Avenue, New York, NY, 10018, USA.
  • Lange C; Labyrinth Global Health, Inc., 546 15th Ave NE, St Petersburg, FL, 33704, USA.
  • O'Rourke T; Labyrinth Global Health, Inc., 546 15th Ave NE, St Petersburg, FL, 33704, USA.
  • Olson SH; Wildlife Conservation Society, Health Program, Bronx, NY, USA.
  • Keatts L; One Health Institute, School of Veterinary Medicine, University of California, Davis, Davis, CA, 95616, USA.
  • Mendoza AP; Wildlife Conservation Society, Health Program, Bronx, NY, USA.
  • Perez A; Wildlife Conservation Society (WCS), Peru Program, Lima, Peru.
  • de Paula CD; Wildlife Conservation Society (WCS), Peru Program, Lima, Peru.
  • Zimmerman D; Wildlife Conservation Society, Health Program, Bronx, NY, USA.
  • Valitutto M; Global Health Program, Smithsonian's National Zoological Park and Conservation Biology Institute, Washington, DC, USA.
  • LeBreton M; Global Health Program, Smithsonian's National Zoological Park and Conservation Biology Institute, Washington, DC, USA.
  • McIver D; Mosaic/Global Viral Cameroon, Yaoundé, Cameroon.
  • Islam A; Metabiota Inc, Nanaimo, VC, Canada.
  • Duong V; EcoHealth Alliance, 520 Eighth Avenue, New York, NY, 10018, USA.
  • Mouiche M; Institut Pasteur du Cambodge, 5 Monivong Blvd, PO Box 983, Phnom Penh, 12201, Cambodia.
  • Shi Z; Mosaic/Global Viral Cameroon, Yaoundé, Cameroon.
  • Mulembakani P; Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan, China.
  • Kumakamba C; Kinshasa School of Public Health, University of Kinshasa, Kinshasa, Democratic Republic of the Congo.
  • Ali M; Metabiota Inc., Kinshasa, Democratic Republic of the Congo.
  • Kebede N; Egypt National Research Centre, 12311, Dokki, Giza, Egypt.
  • Tamoufe U; Aklilu Lemma Institute of Pathobiology, Addis Ababa University, Addis Ababa, Ethiopia.
  • Bel-Nono S; Metabiota Cameroon Ltd, Yaoundé, Centre Region Avenue Mvog-Fouda Ada, Av 1.085, Carrefour Intendance, Yaoundé, BP, 15939, Cameroon.
  • Camara A; Military Veterinarian (Rtd.), P.O. Box CT2585, Accra, Ghana.
  • Pamungkas J; Centre de Recherche en Virologie (VRV) Projet Fievres Hemoraquiques en Guinée, BP, 5680, Nongo/Contéya-Commune de Ratoma, Guinea.
  • Coulibaly K; Primate Research Center, Bogor Agricultural University, Bogor, 16151, Indonesia.
  • Abu-Basha E; Faculty of Veterinary Medicine, Bogor Agricultural University, Darmaga Campus, Bogor, 16680, Indonesia.
  • Kamau J; Department Environment and Health, Institut Pasteur de Côte d'Ivoire, PO BOX 490, Abidjan 01, Ivory Coast.
  • Silithammavong S; Department of Basic Medical Veterinary Sciences, College of Veterinary Medicine, Jordan University of Science and Technology, Ar-Ramtha, Jordan.
  • Desmond J; Molecular Biology Laboratory, Institute of Primate Research, Nairobi, Kenya.
Commun Biol ; 5(1): 844, 2022 08 19.
Article in English | MEDLINE | ID: covidwho-2000941
ABSTRACT
Host-virus associations have co-evolved under ecological and evolutionary selection pressures that shape cross-species transmission and spillover to humans. Observed virus-host associations provide relevant context for newly discovered wildlife viruses to assess knowledge gaps in host-range and estimate pathways for potential human infection. Using models to predict virus-host networks, we predicted the likelihood of humans as hosts for 513 newly discovered viruses detected by large-scale wildlife surveillance at high-risk animal-human interfaces in Africa, Asia, and Latin America. Predictions indicated that novel coronaviruses are likely to infect a greater number of host species than viruses from other families. Our models further characterize novel viruses through prioritization scores and directly inform surveillance targets to identify host ranges for newly discovered viruses.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Viruses / Zoonoses Type of study: Diagnostic study / Observational study / Prognostic study / Randomized controlled trials Limits: Animals / Humans Country/Region as subject: Africa Language: English Journal: Commun Biol Year: 2022 Document Type: Article Affiliation country: S42003-022-03797-9

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Viruses / Zoonoses Type of study: Diagnostic study / Observational study / Prognostic study / Randomized controlled trials Limits: Animals / Humans Country/Region as subject: Africa Language: English Journal: Commun Biol Year: 2022 Document Type: Article Affiliation country: S42003-022-03797-9