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The RNA Interference Effector Protein Argonaute 2 Functions as a Restriction Factor Against SARS-CoV-2.
Lopez-Orozco, Joaquin; Fayad, Nawell; Khan, Juveriya Qamar; Felix-Lopez, Alberto; Elaish, Mohamed; Rohamare, Megha; Sharma, Maansi; Falzarano, Darryl; Pelletier, Jerry; Wilson, Joyce; Hobman, Tom C; Kumar, Anil.
  • Lopez-Orozco J; Department of Cell Biology, Faculty of Medicine & Dentistry, University of Alberta, Edmonton, Canada.
  • Fayad N; Department of Cell Biology, Faculty of Medicine & Dentistry, University of Alberta, Edmonton, Canada.
  • Khan JQ; Department of Biochemistry, Microbiology and Immunology, University of Saskatchewan, Saskatoon, Canada.
  • Felix-Lopez A; Department of Medical Microbiology & Immunology, Faculty of Medicine & Dentistry, University of Alberta, Edmonton, Canada.
  • Elaish M; Department of Cell Biology, Faculty of Medicine & Dentistry, University of Alberta, Edmonton, Canada.
  • Rohamare M; Department of Biochemistry, Microbiology and Immunology, University of Saskatchewan, Saskatoon, Canada.
  • Sharma M; Department of Biochemistry, Microbiology and Immunology, University of Saskatchewan, Saskatoon, Canada.
  • Falzarano D; Vaccine and Infectious Disease Organization (VIDO), University of Saskatchewan, Saskatoon, Canada; Department of Veterinary Microbiology, University of Saskatchewan, Saskatoon, Canada.
  • Pelletier J; Department of Biochemistry, McGill University, Montreal, Canada.
  • Wilson J; Department of Biochemistry, Microbiology and Immunology, University of Saskatchewan, Saskatoon, Canada.
  • Hobman TC; Department of Cell Biology, Faculty of Medicine & Dentistry, University of Alberta, Edmonton, Canada; Department of Medical Microbiology & Immunology, Faculty of Medicine & Dentistry, University of Alberta, Edmonton, Canada; Li Ka Shing Institute of Virology, University of Alberta, Edmon
  • Kumar A; Department of Biochemistry, Microbiology and Immunology, University of Saskatchewan, Saskatoon, Canada. Electronic address: anil.kumar@usask.ca.
J Mol Biol ; : 168170, 2023 Jun 03.
Article in English | MEDLINE | ID: covidwho-20231260
ABSTRACT
Argonaute 2 (Ago2) is a key component of the RNA interference (RNAi) pathway, a gene-regulatory system that is present in most eukaryotes. Ago2 uses microRNAs (miRNAs) and small interfering RNAs (siRNAs) for targeting to homologous mRNAs which are then degraded or translationally suppressed. In plants and invertebrates, the RNAi pathway has well-described roles in antiviral defense, but its function in limiting viral infections in mammalian cells is less well understood. Here, we examined the role of Ago2 in replication of the betacoronavirus SARS-CoV-2, the etiologic agent of COVID-19. Microscopic analyses of infected cells revealed that a pool of Ago2 closely associates with viral replication sites and gene ablation studies showed that loss of Ago2 resulted in over 1,000-fold increase in peak viral titers. Replication of the alphacoronavirus 229E was also significantly increased in cells lacking Ago2. The antiviral activity of Ago2 was dependent on both its ability to bind small RNAs and its endonuclease function. Interestingly, in cells lacking Dicer, an upstream component of the RNAi pathway, viral replication was the same as in parental cells. This suggests that the antiviral activity of Ago2 is independent of Dicer processed miRNAs. Deep sequencing of infected cells by other groups identified several SARS-CoV-2-derived small RNAs that bind to Ago2. A mutant virus lacking the most abundant ORF7A-derived viral miRNA was found to be significantly less sensitive to Ago2-mediated restriction. This combined with our findings that endonuclease and small RNA-binding functions of Ago2 are required for its antiviral function, suggests that Ago2-small viral RNA complexes target nascent viral RNA produced at replication sites for cleavage. Further studies are required to elucidate the processing mechanism of the viral small RNAs that are used by Ago2 to limit coronavirus replication.
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Full text: Available Collection: International databases Database: MEDLINE Type of study: Etiology study / Experimental Studies / Randomized controlled trials Language: English Journal: J Mol Biol Year: 2023 Document Type: Article Affiliation country: J.jmb.2023.168170

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Full text: Available Collection: International databases Database: MEDLINE Type of study: Etiology study / Experimental Studies / Randomized controlled trials Language: English Journal: J Mol Biol Year: 2023 Document Type: Article Affiliation country: J.jmb.2023.168170