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Benchmarking emergency department prediction models with machine learning and public electronic health records.
Xie, Feng; Zhou, Jun; Lee, Jin Wee; Tan, Mingrui; Li, Siqi; Rajnthern, Logasan S/O; Chee, Marcel Lucas; Chakraborty, Bibhas; Wong, An-Kwok Ian; Dagan, Alon; Ong, Marcus Eng Hock; Gao, Fei; Liu, Nan.
  • Xie F; Centre for Quantitative Medicine and Programme in Health Services and Systems Research, Duke-NUS Medical School, Singapore, Singapore.
  • Zhou J; Institute of High Performance Computing, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
  • Lee JW; Centre for Quantitative Medicine and Programme in Health Services and Systems Research, Duke-NUS Medical School, Singapore, Singapore.
  • Tan M; Institute of High Performance Computing, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
  • Li S; Centre for Quantitative Medicine and Programme in Health Services and Systems Research, Duke-NUS Medical School, Singapore, Singapore.
  • Rajnthern LS; School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore, Singapore.
  • Chee ML; Faculty of Medicine, Nursing and Health Sciences, Monash University, Victoria, Australia.
  • Chakraborty B; Centre for Quantitative Medicine and Programme in Health Services and Systems Research, Duke-NUS Medical School, Singapore, Singapore.
  • Wong AI; Department of Statistics and Data Science, National University of Singapore, Singapore, Singapore.
  • Dagan A; Department of Biostatistics and Bioinformatics, Duke University, Durham, NC, USA.
  • Ong MEH; Division of Pulmonary, Allergy, and Critical Care Medicine, Duke University, Durham, NC, USA.
  • Gao F; Department of Emergency Medicine, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.
  • Liu N; MIT Critical Data, Laboratory for Computational Physiology, Institute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA, USA.
Sci Data ; 9(1): 658, 2022 10 27.
Article in English | MEDLINE | ID: covidwho-2087257
ABSTRACT
The demand for emergency department (ED) services is increasing across the globe, particularly during the current COVID-19 pandemic. Clinical triage and risk assessment have become increasingly challenging due to the shortage of medical resources and the strain on hospital infrastructure caused by the pandemic. As a result of the widespread use of electronic health records (EHRs), we now have access to a vast amount of clinical data, which allows us to develop prediction models and decision support systems to address these challenges. To date, there is no widely accepted clinical prediction benchmark related to the ED based on large-scale public EHRs. An open-source benchmark data platform would streamline research workflows by eliminating cumbersome data preprocessing, and facilitate comparisons among different studies and methodologies. Based on the Medical Information Mart for Intensive Care IV Emergency Department (MIMIC-IV-ED) database, we created a benchmark dataset and proposed three clinical prediction benchmarks. This study provides future researchers with insights, suggestions, and protocols for managing data and developing predictive tools for emergency care.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: Benchmarking / COVID-19 Type of study: Prognostic study Limits: Humans Language: English Journal: Sci Data Year: 2022 Document Type: Article Affiliation country: S41597-022-01782-9

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Full text: Available Collection: International databases Database: MEDLINE Main subject: Benchmarking / COVID-19 Type of study: Prognostic study Limits: Humans Language: English Journal: Sci Data Year: 2022 Document Type: Article Affiliation country: S41597-022-01782-9