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Boosting automatic COVID-19 detection performance with self-supervised learning and batch knowledge ensembling.
Li, Guang; Togo, Ren; Ogawa, Takahiro; Haseyama, Miki.
  • Li G; Graduate School of Information Science and Technology, Hokkaido University, N-14, W-9, Kita-Ku, Sapporo, 060-0814, Japan. Electronic address: guang@lmd.ist.hokudai.ac.jp.
  • Togo R; Faculty of Information Science and Technology, Hokkaido University, N-14, W-9, Kita-Ku, Sapporo, 060-0814, Japan. Electronic address: togo@lmd.ist.hokudai.ac.jp.
  • Ogawa T; Faculty of Information Science and Technology, Hokkaido University, N-14, W-9, Kita-Ku, Sapporo, 060-0814, Japan. Electronic address: ogawa@lmd.ist.hokudai.ac.jp.
  • Haseyama M; Faculty of Information Science and Technology, Hokkaido University, N-14, W-9, Kita-Ku, Sapporo, 060-0814, Japan. Electronic address: mhaseyama@lmd.ist.hokudai.ac.jp.
Comput Biol Med ; 158: 106877, 2023 05.
Article in English | MEDLINE | ID: covidwho-2268671
ABSTRACT

PROBLEM:

Detecting COVID-19 from chest X-ray (CXR) images has become one of the fastest and easiest methods for detecting COVID-19. However, the existing methods usually use supervised transfer learning from natural images as a pretraining process. These methods do not consider the unique features of COVID-19 and the similar features between COVID-19 and other pneumonia.

AIM:

In this paper, we want to design a novel high-accuracy COVID-19 detection method that uses CXR images, which can consider the unique features of COVID-19 and the similar features between COVID-19 and other pneumonia.

METHODS:

Our method consists of two phases. One is self-supervised learning-based pertaining; the other is batch knowledge ensembling-based fine-tuning. Self-supervised learning-based pretraining can learn distinguished representations from CXR images without manually annotated labels. On the other hand, batch knowledge ensembling-based fine-tuning can utilize category knowledge of images in a batch according to their visual feature similarities to improve detection performance. Unlike our previous implementation, we introduce batch knowledge ensembling into the fine-tuning phase, reducing the memory used in self-supervised learning and improving COVID-19 detection accuracy.

RESULTS:

On two public COVID-19 CXR datasets, namely, a large dataset and an unbalanced dataset, our method exhibited promising COVID-19 detection performance. Our method maintains high detection accuracy even when annotated CXR training images are reduced significantly (e.g., using only 10% of the original dataset). In addition, our method is insensitive to changes in hyperparameters.

CONCLUSION:

The proposed method outperforms other state-of-the-art COVID-19 detection methods in different settings. Our method can reduce the workloads of healthcare providers and radiologists.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: COVID-19 Type of study: Diagnostic study Limits: Humans Language: English Journal: Comput Biol Med Year: 2023 Document Type: Article

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Full text: Available Collection: International databases Database: MEDLINE Main subject: COVID-19 Type of study: Diagnostic study Limits: Humans Language: English Journal: Comput Biol Med Year: 2023 Document Type: Article