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Outbreak.info Research Library: a standardized, searchable platform to discover and explore COVID-19 resources.
Tsueng, Ginger; Mullen, Julia L; Alkuzweny, Manar; Cano, Marco; Rush, Benjamin; Haag, Emily; Lin, Jason; Welzel, Dylan J; Zhou, Xinghua; Qian, Zhongchao; Latif, Alaa Abdel; Hufbauer, Emory; Zeller, Mark; Andersen, Kristian G; Wu, Chunlei; Su, Andrew I; Gangavarapu, Karthik; Hughes, Laura D.
  • Tsueng G; Department of Integrative, Structural and Computational Biology, the Scripps Research Institute, La Jolla, CA, USA. gtsueng@scripps.edu.
  • Mullen JL; Department of Integrative, Structural and Computational Biology, the Scripps Research Institute, La Jolla, CA, USA.
  • Alkuzweny M; Department of Biological Sciences, University of Notre Dame, Notre Dame, IN, USA.
  • Cano M; Department of Immunology and Microbiology, the Scripps Research Institute, La Jolla, CA, USA.
  • Rush B; Department of Integrative, Structural and Computational Biology, the Scripps Research Institute, La Jolla, CA, USA.
  • Haag E; Ocuvera, Lincoln, NE, USA.
  • Lin J; Department of Integrative, Structural and Computational Biology, the Scripps Research Institute, La Jolla, CA, USA.
  • Welzel DJ; Department of Integrative, Structural and Computational Biology, the Scripps Research Institute, La Jolla, CA, USA.
  • Zhou X; Department of Integrative, Structural and Computational Biology, the Scripps Research Institute, La Jolla, CA, USA.
  • Qian Z; Department of Integrative, Structural and Computational Biology, the Scripps Research Institute, La Jolla, CA, USA.
  • Latif AA; Department of Integrative, Structural and Computational Biology, the Scripps Research Institute, La Jolla, CA, USA.
  • Hufbauer E; Department of Immunology and Microbiology, the Scripps Research Institute, La Jolla, CA, USA.
  • Zeller M; Department of Immunology and Microbiology, the Scripps Research Institute, La Jolla, CA, USA.
  • Andersen KG; Department of Immunology and Microbiology, the Scripps Research Institute, La Jolla, CA, USA.
  • Wu C; Department of Immunology and Microbiology, the Scripps Research Institute, La Jolla, CA, USA.
  • Su AI; Scripps Research Translational Institute, La Jolla, CA, USA.
  • Gangavarapu K; Department of Integrative, Structural and Computational Biology, the Scripps Research Institute, La Jolla, CA, USA.
  • Hughes LD; Scripps Research Translational Institute, La Jolla, CA, USA.
Nat Methods ; 20(4): 536-540, 2023 04.
Article in English | MEDLINE | ID: covidwho-2284627
ABSTRACT
Outbreak.info Research Library is a standardized, searchable interface of coronavirus disease 2019 (COVID-19) and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) publications, clinical trials, datasets, protocols and other resources, built with a reusable framework. We developed a rigorous schema to enforce consistency across different sources and resource types and linked related resources. Researchers can quickly search the latest research across data repositories, regardless of resource type or repository location, via a search interface, public application programming interface (API) and R package.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: COVID-19 Type of study: Prognostic study Limits: Humans Language: English Journal: Nat Methods Journal subject: Laboratory Techniques and procedures Year: 2023 Document Type: Article Affiliation country: S41592-023-01770-w

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Full text: Available Collection: International databases Database: MEDLINE Main subject: COVID-19 Type of study: Prognostic study Limits: Humans Language: English Journal: Nat Methods Journal subject: Laboratory Techniques and procedures Year: 2023 Document Type: Article Affiliation country: S41592-023-01770-w