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Multiple models for outbreak decision support in the face of uncertainty.
Shea, Katriona; Borchering, Rebecca K; Probert, William J M; Howerton, Emily; Bogich, Tiffany L; Li, Shou-Li; van Panhuis, Willem G; Viboud, Cecile; Aguás, Ricardo; Belov, Artur A; Bhargava, Sanjana H; Cavany, Sean M; Chang, Joshua C; Chen, Cynthia; Chen, Jinghui; Chen, Shi; Chen, YangQuan; Childs, Lauren M; Chow, Carson C; Crooker, Isabel; Del Valle, Sara Y; España, Guido; Fairchild, Geoffrey; Gerkin, Richard C; Germann, Timothy C; Gu, Quanquan; Guan, Xiangyang; Guo, Lihong; Hart, Gregory R; Hladish, Thomas J; Hupert, Nathaniel; Janies, Daniel; Kerr, Cliff C; Klein, Daniel J; Klein, Eili Y; Lin, Gary; Manore, Carrie; Meyers, Lauren Ancel; Mittler, John E; Mu, Kunpeng; Núñez, Rafael C; Oidtman, Rachel J; Pasco, Remy; Pastore Y Piontti, Ana; Paul, Rajib; Pearson, Carl A B; Perdomo, Dianela R; Perkins, T Alex; Pierce, Kelly; Pillai, Alexander N.
  • Shea K; Department of Biology, The Pennsylvania State University, University Park, PA 16802.
  • Borchering RK; Center for Infectious Disease Dynamics, The Pennsylvania State University, University Park, PA 16802.
  • Probert WJM; Department of Biology, The Pennsylvania State University, University Park, PA 16802.
  • Howerton E; Center for Infectious Disease Dynamics, The Pennsylvania State University, University Park, PA 16802.
  • Bogich TL; Nuffield Department of Medicine, Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford OX3 7LF, United Kingdom.
  • Li SL; Department of Biology, The Pennsylvania State University, University Park, PA 16802.
  • van Panhuis WG; Center for Infectious Disease Dynamics, The Pennsylvania State University, University Park, PA 16802.
  • Viboud C; Department of Biology, The Pennsylvania State University, University Park, PA 16802.
  • Aguás R; Center for Infectious Disease Dynamics, The Pennsylvania State University, University Park, PA 16802.
  • Belov AA; State Key Laboratory of Grassland Agro-ecosystems, Center for Grassland Microbiome, and College of Pastoral, Agriculture Science and Technology, Lanzhou University, Lanzhou, 73000, People's Republic of China.
  • Bhargava SH; Department of Epidemiology, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, PA 15260.
  • Cavany SM; Fogarty International Center, National Institutes of Health, Bethesda, MD 20892.
  • Chang JC; Nuffield Department of Medicine, Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford OX3 7LF, United Kingdom.
  • Chen C; Office of Biostatistics and Pharmacovigilance, Center for Biologics Evaluation and Research, Food and Drug Administration, Silver Spring, MD 20993.
  • Chen J; Department of Biology, University of Florida, Gainesville, FL 32611.
  • Chen S; Department of Biological Sciences, University of Notre Dame, Notre Dame, IN 46556.
  • Chen Y; Epidemiology and Biostatistics Section, Rehabilitation Medicine, Clinical Center, National Institutes of Health, Bethesda, MD 20892.
  • Childs LM; Mederrata Research Inc, Columbus, OH 43212.
  • Chow CC; Department of Civil and Environmental Engineering, University of Washington, Seattle, WA 98195.
  • Crooker I; Department of Computer Science, University of California, Los Angeles, Los Angeles, CA 90095.
  • Del Valle SY; Department of Public Health Sciences, University of North Carolina at Charlotte, Charlotte, NC 28223.
  • España G; School of Data Science, University of North Carolina at Charlotte, Charlotte, NC 28223.
  • Fairchild G; Mechatronics, Embedded Systems and Automation Laboratory, School of Engineering, University of California, Merced, CA 95343.
  • Gerkin RC; Department of Mathematics, Virginia Tech, Blacksburg, VA 24061.
  • Germann TC; Mathematical Biology Section, Laboratory of Biological Modeling, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892.
  • Gu Q; Los Alamos National Laboratory, Los Alamos, NM 87545.
  • Guan X; Los Alamos National Laboratory, Los Alamos, NM 87545.
  • Guo L; Department of Biological Sciences, University of Notre Dame, Notre Dame, IN 46556.
  • Hart GR; Los Alamos National Laboratory, Los Alamos, NM 87545.
  • Hladish TJ; School of Life Sciences, Arizona State University, Tempe, AZ 85287.
  • Hupert N; Los Alamos National Laboratory, Los Alamos, NM 87545.
  • Janies D; Department of Computer Science, University of California, Los Angeles, Los Angeles, CA 90095.
  • Kerr CC; Department of Civil and Environmental Engineering, University of Washington, Seattle, WA 98195.
  • Klein DJ; School of Mathematics, Jilin University, Changchun, Jilin 130012, People's Republic of China.
  • Klein EY; Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, WA 98109.
  • Lin G; Department of Biology, University of Florida, Gainesville, FL 32611.
  • Manore C; Emerging Pathogens Institute, University of Florida, Gainesville, FL 32610.
  • Meyers LA; Department of Population Health Sciences, Division of Epidemiology, Weill Cornell Medicine, Cornell University, New York, NY 10065.
  • Mittler JE; Computational Intelligence to Predict Health and Environmental Risks, University of North Carolina at Charlotte, Charlotte, NC 28223.
  • Mu K; Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, WA 98109.
  • Núñez RC; Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, WA 98109.
  • Oidtman RJ; Department of Emergency Medicine, Johns Hopkins University, Baltimore, MD 21209.
  • Pasco R; One Health Trust, Washington, DC 20015.
  • Pastore Y Piontti A; Department of Emergency Medicine, Johns Hopkins University, Baltimore, MD 21209.
  • Paul R; One Health Trust, Washington, DC 20015.
  • Pearson CAB; Los Alamos National Laboratory, Los Alamos, NM 87545.
  • Perdomo DR; Department of Integrative Biology, The University of Texas at Austin, Austin, TX 78712.
  • Perkins TA; Department of Microbiology, School of Medicine, University of Washington, Seattle, WA 98195.
  • Pierce K; Laboratory for the Modeling of Biological and Socio-technical Systems, Network Science Institute, Northeastern University, Boston, MA 02115.
  • Pillai AN; Institute for Disease Modeling, Global Health Division, Bill & Melinda Gates Foundation, Seattle, WA 98109.
Proc Natl Acad Sci U S A ; 120(18): e2207537120, 2023 05 02.
Article in English | MEDLINE | ID: covidwho-2303598
ABSTRACT
Policymakers must make management decisions despite incomplete knowledge and conflicting model projections. Little guidance exists for the rapid, representative, and unbiased collection of policy-relevant scientific input from independent modeling teams. Integrating approaches from decision analysis, expert judgment, and model aggregation, we convened multiple modeling teams to evaluate COVID-19 reopening strategies for a mid-sized United States county early in the pandemic. Projections from seventeen distinct models were inconsistent in magnitude but highly consistent in ranking interventions. The 6-mo-ahead aggregate projections were well in line with observed outbreaks in mid-sized US counties. The aggregate results showed that up to half the population could be infected with full workplace reopening, while workplace restrictions reduced median cumulative infections by 82%. Rankings of interventions were consistent across public health objectives, but there was a strong trade-off between public health outcomes and duration of workplace closures, and no win-win intermediate reopening strategies were identified. Between-model variation was high; the aggregate results thus provide valuable risk quantification for decision making. This approach can be applied to the evaluation of management interventions in any setting where models are used to inform decision making. This case study demonstrated the utility of our approach and was one of several multimodel efforts that laid the groundwork for the COVID-19 Scenario Modeling Hub, which has provided multiple rounds of real-time scenario projections for situational awareness and decision making to the Centers for Disease Control and Prevention since December 2020.
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Full text: Available Collection: International databases Database: MEDLINE Main subject: COVID-19 Type of study: Experimental Studies / Observational study / Prognostic study Limits: Humans Language: English Journal: Proc Natl Acad Sci U S A Year: 2023 Document Type: Article

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Full text: Available Collection: International databases Database: MEDLINE Main subject: COVID-19 Type of study: Experimental Studies / Observational study / Prognostic study Limits: Humans Language: English Journal: Proc Natl Acad Sci U S A Year: 2023 Document Type: Article